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Cy5-alkyne

Product Name
Cy5-alkyne
CAS No.
1223357-57-0
Chemical Name
Cy5-alkyne
Synonyms
Cy5-alkyne;Clickable Cy5-alkyne;lipo CY5 (Me) YNE.Cl;3,3-Dimethyl-1-(6-oxo-6-(prop-2-yn-1-ylamino)hexyl)-2-(5-(1,3,3-trimethylindolin-2-ylidene)penta-1,3-dien-1-yl)-3H-indol-1-ium chloride
CBNumber
CB42985725
Molecular Formula
C35H42ClN3O
Formula Weight
556.19
MOL File
1223357-57-0.mol
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Cy5-alkyne Property

storage temp. 
-20°C
solubility 
Soluble in DMSO, DMF, DCM
form 
powder
color 
Brown to black
Appearance
Dark blue solid
ex/em
640/664 nm (PBS buffer)
ε(extinction coefficient)
250000 L⋅mol−1⋅cm−1
Φ(quantum yield)
0.2
InChIKey
VOWXUNAERRNFLE-UHFFFAOYSA-N
SMILES
C([N+]1=C(C(C)(C)C2=CC=CC=C12)C=CC=CC=C1C(C2=CC=CC=C2N1C)(C)C)CCCCC(=O)NCC#C.[Cl-]
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Safety

Hazard Codes 
Xi
Risk Statements 
36/37/38
Safety Statements 
26
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Hazard and Precautionary Statements (GHS)

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N-Bromosuccinimide Price

Sigma-Aldrich
Product number
777358
Product name
Cy5-alkyne
Purity
95% (HPLC)
Packaging
1mg
Price
$169
Updated
2025/07/31
Sigma-Aldrich
Product number
777358
Product name
Cy5-alkyne
Purity
95% (HPLC)
Packaging
5mg
Price
$470
Updated
2025/07/31
BroadPharm
Product number
BP-22528
Product name
Cy5alkyne
Purity
96%
Packaging
1mg
Price
$100
Updated
2021/12/16
BroadPharm
Product number
BP-22528
Product name
Cy5alkyne
Purity
96%
Packaging
5mg
Price
$200
Updated
2021/12/16
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Cy5-alkyne Chemical Properties,Usage,Production

Description

Cy5 alkyne is a cynaine linker containing an alkyne group, which enables Click Chemistry to attach deeply colored and photostable Cyanine5 fluorophore to various azide-bearing molecules. Cyanine5 is a popular fluorophore that has been widely used for various applications including intact organism imaging.

Chemical Properties

Appearance: Dark blue solid
ex/em: 640/664 nm (PBS buffer)
Extinction coefficient (ε): 250000 L??mol??1??cm??1
Quantum yield (Φ): 0.2

Uses

Cyanine5 alkyne (Alkyne-Cy5) is a fluorescent dye used to label azide proteins and can be used to analyse post-translational modifications of proteins, glycosylation etc. Cyanine5 alkyne can also be used as a mitochondrial OXPHOS inhibitor to inhibit the growth of cancer stem cells (CSC)[1][2]. Cyanine5 alkyne is a click chemistry reagent, it contains an Alkyne group and can undergo copper-catalyzed azide-alkyne cycloaddition (CuAAc) with molecules containing Azide groups.

References

[1] Amanda R Burnham-Marusich, et al. Size-matched alkyne-conjugated cyanine fluorophores to identify differences in protein glycosylation. Electrophoresis. 2014 Sep;35(18):2621-5. DOI:10.1002/elps.201400241
[2] Camillo Sargiacomo, et al. MitoTracker Deep Red (MTDR) Is a Metabolic Inhibitor for Targeting Mitochondria and Eradicating Cancer Stem Cells (CSCs), With Anti-Tumor and Anti-Metastatic Activity In Vivo. Front Oncol. 2021 Jul 30;11:678343. DOI:10.3389/fonc.2021.678343

Abs/Em Maxima

646/662 nm

Fluoresene quantum yield

0.2

Extinction Coefficient

250000

CF260

0.03

CF280

0.04

Microscopy Laser Line

633 or 635 nm

Flow Cytometry Laser Line

633 or 635 nm

Spectrally Similar Dyes

Alexa Fluor® 647, CF™ 647 Dye, DyLight™649

Cy5-alkyne Preparation Products And Raw materials

Raw materials

Preparation Products

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Cy5-alkyne Suppliers

Shanghai Annengjian Biomedical Technology Co., LTD
Tel
021-68781987 13818305065
Email
sales@energybiopharma.com
Country
China
ProdList
652
Advantage
58
Okeanos Tech Co,. Ltd.
Tel
010-62651721 18610486005
Fax
01062651521-808
Email
minghui.yu@okeanos.com.cn
Country
China
ProdList
495
Advantage
60
Bide Pharmatech Ltd.
Tel
400-164-7117 13681763483
Fax
+86-21-61629029
Email
product02@bidepharm.com
Country
China
ProdList
39966
Advantage
60
Alfa Chemistry
Tel
1-516-6625404
Fax
1-516-927-0118
Email
support@alfa-chemistry.com
Country
United States
ProdList
9171
Advantage
60
Shanghai YuanYe Biotechnology Co., Ltd.
Tel
021-61312847; 18021002903
Fax
QQ:3008007432
Email
3008007409@qq.com
Country
China
ProdList
71826
Advantage
60
Xi'an Confluore Biological Technology Co., Ltd.
Tel
+86-156-80926068 +86-15680926068
Email
1924344760@qq.com
Country
China
ProdList
4952
Advantage
58
Henan Alfachem Co.,Ltd.
Tel
0371-55051623 18137891487
Fax
QQ:2853979817
Email
2853979817@qq.com
Country
China
ProdList
9992
Advantage
58
Beijing Minruida Technology Co., Ltd.
Tel
010-82387566 18001021521;
Fax
82387566-801
Email
sales@mreda.com.cn
Country
China
ProdList
10083
Advantage
58
Shanghai TenSus Biotechnology Co., Ltd.
Tel
021-50895067 18616507272
Fax
021-50895067
Email
tensus@163.com
Country
China
ProdList
8073
Advantage
58
Shaanxi Xinyan Bomei Biotechnology Co., Ltd.
Tel
13892832556
Email
2440688701@qq.com
Country
China
ProdList
1994
Advantage
58
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View Lastest Price from Cy5-alkyne manufacturers

Xian confluore Biological Technology Co., Ltd.
Product
Cyanine5 alkyne 1223357-57-0
Price
US $0.00/mg
Min. Order
1mg
Purity
>99.00%
Supply Ability
1mg
Release date
2024-03-21

1223357-57-0, Cy5-alkyneRelated Search:


  • Cy5-alkyne
  • lipo CY5 (Me) YNE.Cl
  • Clickable Cy5-alkyne
  • 3,3-Dimethyl-1-(6-oxo-6-(prop-2-yn-1-ylamino)hexyl)-2-(5-(1,3,3-trimethylindolin-2-ylidene)penta-1,3-dien-1-yl)-3H-indol-1-ium chloride
  • 1223357-57-0