ChemicalBook > CAS DataBase List > 5'-Deoxy-5-fluorocytidine

5'-Deoxy-5-fluorocytidine

Product Name
5'-Deoxy-5-fluorocytidine
CAS No.
66335-38-4
Chemical Name
5'-Deoxy-5-fluorocytidine
Synonyms
5'-DFCR;5-F-5'-dC;[2H2]-5-DFCR;Capecitabine-1;Capecitabine Imp.A;Deoxy fluorocytidine;Capecitabine USP RC A;Capecitabine USP IMp.A;Capecitabine Impurity 1;5'-Deoxy-5-fluorocytidin
CBNumber
CB0258261
Molecular Formula
C9H12FN3O4
Formula Weight
245.21
MOL File
66335-38-4.mol
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5'-Deoxy-5-fluorocytidine Property

Melting point:
196-198°C
Boiling point:
437.9±55.0 °C(Predicted)
Density 
1.84±0.1 g/cm3(Predicted)
storage temp. 
Keep in dark place,Sealed in dry,Room Temperature
solubility 
DMSO (Slightly), Methanol (Slightly)
form 
Solid
pka
13.65±0.70(Predicted)
color 
White to Light Beige
Stability:
HYGROSCOPIC
CAS DataBase Reference
66335-38-4(CAS DataBase Reference)
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Safety

Hazard Codes 
Xn,Xi
Risk Statements 
20/21/22-36/37/38
Safety Statements 
26-36-37/39-24/25
HS Code 
29349990
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Hazard and Precautionary Statements (GHS)

Symbol(GHS)
Signal word
Danger
Hazard statements

H350May cause cancer

H360May damage fertility or the unborn child

Precautionary statements

P261Avoid breathing dust/fume/gas/mist/vapours/spray.

P305+P351+P338IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do. Continuerinsing.

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N-Bromosuccinimide Price

Sigma-Aldrich
Product number
Y0001643
Product name
Capecitabine impurity A
Purity
European Pharmacopoeia (EP) Reference Standard
Packaging
5 mg
Price
$225
Updated
2025/07/31
Sigma-Aldrich
Product number
PHR2849
Product name
Capecitabine Related Compound A
Purity
certified reference material, pharmaceutical secondary standard
Packaging
50 mg
Price
$506.35
Updated
2025/07/31
Sigma-Aldrich
Product number
Y0001643
Product name
Capecitabine impurity A
Purity
European Pharmacopoeia (EP) Reference Standard
Packaging
Y0001643
Price
$218
Updated
2023/06/20
TCI Chemical
Product number
D4342
Product name
5'-Deoxy-5-fluorocytidine
Purity
>98.0%(HPLC)(T)
Packaging
1g
Price
$41
Updated
2025/07/31
TCI Chemical
Product number
D4342
Product name
5'-Deoxy-5-fluorocytidine
Purity
>98.0%(HPLC)(T)
Packaging
5g
Price
$125
Updated
2025/07/31
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5'-Deoxy-5-fluorocytidine Chemical Properties,Usage,Production

Chemical Properties

White Solid

Uses

A metabolite of Capecitabine.

Definition

ChEBI: 5'-Deoxy-5-fluorocytidine is a N-glycosyl compound.

Synthesis

154361-50-9

66335-38-4

1. Pentyl (1-((2R,3R,4S,5R)-3,4-dihydroxy-5-methyltetrahydrofuran-2-yl)-5-fluoro-2-oxo-1,2-dihydropyrimidin-4-yl)carbamate (capecitabine, 4.5 g, 12.5 mmol) was suspended with potassium carbonate (8.8 g, 63.77 mmol) in methanol (250 mL) and N,N- dimethylformamide (DMF, 10 mL). The mixture was heated to reflux for 24 hours. Upon completion of the reaction, the reaction solution was cooled and concentrated to dryness under reduced pressure at below 45 °C. The residue was dissolved in hot methanol, filtered and washed with hot methanol. The filtrate was pre-adsorbed on silica gel and purified by fast column chromatography using 50% methanol/ethyl acetate as eluent to afford 1-[3,4-dihydroxy-5-methyltetrahydrofuran-2-yl]-4-amino-1H-pyrimidin-2-one (3.0 g, 90% yield). 2. The above product (3.0 g) was suspended in chloroform (125 mL) and heated to 50 °C. The product (3.0 g) was added to the mixture. Acetic acid (2 mL, 34 mmol) and acetyl chloride (20 mL, 206 mmol) were added sequentially and stirred at 50 °C for 7 hours, followed by continued stirring at 20 °C for 72 hours. At the end of the reaction, ether (100 mL) was added, the solid was collected by filtration and washed with ether to afford 1-[3,4-diacetoxy-5-methyltetrahydrofuran-2-yl]-4-amino-1H-pyrimidin-2-one hydrochloride (4.0 g, 90% yield). 3. The above hydrochloride (2.07 g, 5.7 mmol) was dissolved in pyridine (1.4 mL, 17.4 mmol) and dichloromethane (DCM, 15 mL) with 5-nitrothiophen-2-ylmethanol (1.47 g, 9.3 mmol). A 2M toluene solution of phosgene (3.6 mL, 7.2 mmol) was slowly added at 0 °C and stirred for 2.5 h. After 2.5 h, the same amount of phosgene solution was added again and stirring was continued for 2 h at 0 °C, followed by 18 h of refrigeration. The reaction solution was partitioned with ethyl acetate and brine, the aqueous phase was extracted with ethyl acetate, the organic phases were combined, dried and concentrated under reduced pressure. The residue was purified by silica gel column chromatography with 2% methanol/DCM as eluent to give an off-white foamy product (400 mg, 14% yield). Thin layer chromatography (TLC) showed Rf=0.45 (2% methanol/ethyl acetate as unfolding agent). Liquid chromatography-mass spectrometry (LC-MS) analysis showed a retention time of 4.68 min (TFA 20-50% gradient) and a mass m/z of 201/159/143. nuclear magnetic resonance hydrogen spectra (1H NMR, 500 MHz, DMSO-d6) δ 11.20 (1H, broad single peak, NH), 8.3 (1H, broad peak, NCH=CF). 8.05 (1H, single peak, HarH), 7.30 (1H, single peak, HarH), 5.80 (1H, single peak, NCHO), 5.42 (3H, multiple peaks, HarCH2OCONH, CHOAc), 5.15 (1H, single peak, CHOAc), 4.05 (1H, multiple peaks, OCHCH3), 3.45 (2H, multiple peak, 2×CHOAc), 2.48 (3H, single peak, OAc), 2.05 (3H, single peak, OAc), 1.37 (3H, single peak, OCHCH3) ppm.

References

[1] Patent: WO2006/32921, 2006, A1. Location in patent: Page/Page column 37-38

5'-Deoxy-5-fluorocytidine Preparation Products And Raw materials

Raw materials

Preparation Products

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5'-Deoxy-5-fluorocytidine Suppliers

J & K SCIENTIFIC LTD.
Tel
18210857532; 18210857532
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86-10-82849933
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jkinfo@jkchemical.com
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China
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3B Pharmachem (Wuhan) International Co.,Ltd.
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821-50328103-801 18930552037
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86-21-50328109
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3bsc@sina.com
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China
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TCI (Shanghai) Development Co., Ltd.
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021-67121386
Fax
021-67121385
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Sales-CN@TCIchemicals.com
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China
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Ark Pharm, Inc.
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847-367-3680
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847-367-3681
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sales@arkpharminc.com
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United States
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Energy Chemical
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+86 (0) 571 85 58 67 18
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JinYan Chemicals(ShangHai) Co.,Ltd.
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13817811078
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Pure Chemistry Scientific Inc.
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001-857-928-2050 or 1-888-588-9418
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001-617-206-9595
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Adamas Reagent, Ltd.
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400-6009262 16621234537
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021-64823266
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Chemsky(shanghai)International Co.,Ltd.
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021-50135380
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View Lastest Price from 5'-Deoxy-5-fluorocytidine manufacturers

Hebei Fengjia New Material Co., Ltd
Product
5'-Deoxy-5-fluorocytidine 66335-38-4
Price
US $5.00/kg
Min. Order
1kg
Purity
0.99
Supply Ability
10000
Release date
2024-09-04
Hebei Chuanghai Biotechnology Co., Ltd
Product
5'-Deoxy-5-fluorocytidine 66335-38-4
Price
US $10.00/KG
Min. Order
100KG
Purity
99%
Supply Ability
100 mt
Release date
2024-12-02
Henan Aochuang Chemical Co.,Ltd.
Product
5'-Deoxy-5-fluorocytidine 66335-38-4
Price
US $0.00-0.00/KG
Min. Order
1KG
Purity
98%
Supply Ability
1ton
Release date
2022-10-12

66335-38-4, 5'-Deoxy-5-fluorocytidineRelated Search:


  • 5'-DFCR
  • 5'-Deoxy-5-fluoro-D-cytidine
  • 5''-DEOXY-5-FLUOROCYTIDINE (5''-DFCR)
  • 5-Fluoro-5’-deoxycytidine, 5’-DFCR
  • Capecitabine Related Compound A (10 mg) (5'-deoxy-5-fluorocytidine)
  • 5'-Deoxy-5-fluorocytidin
  • CAPECITABINE related substance USP A
  • Deoxy-5-fluorocytidine-D2
  • 4-aMino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-Methyloxolan-2-yl]-5-fluoro-1,2-dihydropyriMidin-2-one
  • Capecitabine USP IMp.A
  • 4-aMino-1-((2R,3R,4S,5R)-3,4-dihydroxy-5-Methyltetrahydrofuran-2-yl)-5-fluoropyriMidin-2(1H)-one
  • 5-F-5'-dC
  • Capecitabine USP RC A
  • 5-DFCR (Deoxy-5-fluorocytidine)
  • 5-DFCR-D2 (Deoxy-5-fluorocytidine-d2)
  • 5'-DFCR (5'-Deoxy-5-fluorocytidine)
  • Capecitabine-1
  • Capecitabine EP Impurity A (USP RC A)
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  • Capecitabine EP Impurity A
  • Capecitabine Impurity A(USP)
  • Capecitabine Impurity 1
  • Capecitabine EP Impurity A (5'-DFCR)
  • Deoxy fluorocytidine
  • [2H2]-5-DFCR
  • 5'-Deoxy-5-fluorocytidine&gt
  • Capecitabine Imp.A
  • 5'-Deoxy-5-fluorocytidine USP/EP/BP
  • 4-Amino-1-((2R,3R,4S,5R)-3,4-dihydroxy-5-methyltetrahydrofuran-2-yl)-5-fluoropyrimidin-2(1H)-one (Capecitabine Impurity)
  • Capecitabine EP Impurity A/ Capecitabine Related Compund A
  • Capacitabine USP Related Compound A
  • 5-Deoxy-5-fluoroucytidineQ: What is 5-Deoxy-5-fluoroucytidine Q: What is the CAS Number of 5-Deoxy-5-fluoroucytidine Q: What is the storage condition of 5-Deoxy-5-fluoroucytidine Q: What are the applications of 5-Deoxy-5-fluoroucytidine
  • Capecitabine Related Compound A (5''-deoxy-5-fluorocytidine) (1090717)
  • 5’-Deoxy-5-fluorocytidine,Capecitabine related compound A
  • Capecitabine USP Related Compound A
  • 5'-Deoxy-5-fluorocytidine,98%
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  • 5-Fluoro-5'-deoxycytidine
  • 4-Amino-1-(5-deoxy-beta-D-ribofuranosyl)-5-fluoropyrimidin-2(1H)-one (5'-Deoxy-5-fluorocytidine)
  • 5'-Deoxy-5-fluorocytidine
  • 4-Amino-1-(5-deoxy-beta-D-ribofuranosyl)-5-fluoropyrimidin-2(1H)-one (5'-Deoxy-5-fluorocytidine)
  • Capecitabine EP Impurity A(Capecitabine USP Related Compound A)
  • 66335-38-4
  • 82104-74-6
  • C9H12N3O3F
  • C9H12O4N3F
  • C9H12FN3O5
  • C9H12FN3O
  • Heterocycles
  • Bases & Related Reagents
  • Nucleotides