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CY3 AMIDITE

Product Name
CY3 AMIDITE
Chemical Name
CY3 AMIDITE
Synonyms
CY3 AMIDITE;Cyanine3 Phosphoramidite
CBNumber
CB0231600
Formula Weight
0
MOL File
Mol file
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CY3 AMIDITE Property

solubility 
good in acetonitrile, dichloromethane
Appearance
red powder
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Hazard and Precautionary Statements (GHS)

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CY3 AMIDITE Chemical Properties,Usage,Production

Description

Cyanine3 is a fluorophore that is widely used in molecular biology experiments such as oligonucleotide labeling followed by oligonucleotide detection. By its spectral characteristics, Cyanine3 is a dye with a fluorescence maximum at 570 nm in the yellow spectrum range.


Cyanine3 phosphoramidite 5’ is used in oligonucleotide synthesis for the production of 5’-cyanine3-labeled oligonucleotides. The reagent is compatible with various oligonucleotide synthesizers.


This phosphoramidite can be used for the synthesis of fluorescence-labeled primers and hybridization probes such as TaqMan and Molecular Beacon. Such labeled probes can be detected in multiplex real-time PCR in the TAMRA channel.


Condensation: 3 min. Use 0.02 M iodine solution at the oxidation step to avoid degradation of the cyanine dye.


Deprotection: At room temperature with 30% aqueous ammonium solution. It is recommended to use nucleic bases with labile protective groups for deprotection for not more than 2 h at less than 55°C. AMA (30% aqueous ammonium solution/40% aqueous methylamine 1:1 (v/v)) can be used for 10 min at 65°C in the presence of acetyldeoxycytidine. If deoxyguanidine with a dimethylformamidine protective group is used during synthesis, deprotect with 30% aqueous ammonium solution for 2 h at 65°C. If deoxyguanidine with an isobutyryl protective group is used during synthesis, deprotect for 24-36 h at room temperature.

Abs/Em Maxima

555/570 nm

Fluoresene quantum yield

0.31

Extinction Coefficient

150000

CF260

0.04

CF280

0.09

CY3 AMIDITE Preparation Products And Raw materials

Raw materials

Preparation Products

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CY3 AMIDITE Suppliers

Qingdao Judian'er Technology Co., Ltd
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15964234177
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China
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Santa Cruz Biotechnology Inc
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Guangzhou Baben Biotechnology Co., Ltd.
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17130848100
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