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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
ethyl 2-ethyl-2-methylbutanoate
CAS:
19945-14-3
MF:
C9H18O2
Structure:
Chemical Name:
(3R,5S)-5-(hydroxymethyl)-1-tosylpyrrolidin-3-ol
CAS:
5605-46-9
MF:
C12H17NO4S
Structure:
Chemical Name:
2,5-Pyrrolidinedione, 3-(5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinolin-1-yl)-4-(1H-indol-3-yl)-, (3S,4S)-
CAS:
905854-03-7
MF:
C23H19N3O2
Structure:
Chemical Name:
ethyl 7-(difluoromethyl)-5-phenylpyrazolo[1,5-a]pyrimidine-3-carboxylate
CAS:
438219-16-0
MF:
C16H13F2N3O2
Structure:
Chemical Name:
2-CHLORO-5,6-DIMETHYLBENZIMIDAZOLE
CAS:
39791-96-3
MF:
C9H9ClN2
Structure:
Chemical Name:
ethyl 5-nitro-2,6-dioxo-3H-pyrimidine-4-carboxylate
CAS:
52047-16-2
MF:
C7H7N3O6
Structure:
Chemical Name:
2-Methylindoline
CAS:
6872-06-6
MF:
C9H11N
Structure:
Chemical Name:
OXO-PYRROLIDIN-1-YL-ACETIC ACID
CAS:
49791-37-9
MF:
C6H9NO3
Structure:
Chemical Name:
4-(1H-imidazol-1-yl)pyridine
CAS:
25700-16-7
MF:
C8H7N3
Structure:
Chemical Name:
2-Bromo-1-methyl-1H-imidazole-4-carboxylic acid
CAS:
852181-03-4
MF:
C5H5BrN2O2
Structure:
Chemical Name:
5-(BROMOMETHYL)OXAZOLE
CAS:
127232-42-2
MF:
C4H4BrNO
Structure:
Chemical Name:
CHEMBRDG-BB 4003804
CAS:
99858-80-7
MF:
C11H15NO
Structure:
Chemical Name:
4-chloro-5-methoxy-2-(4-pyridinyl)pyrimidine
CAS:
133661-38-8
MF:
C10H8ClN3O
Structure:
Chemical Name:
5,6,7,8-Tetrahydro-imidazo[1,2-a]pyrazine-2-carboxylic acid ethyl ester
CAS:
91476-82-3
MF:
C9H13N3O2
Structure:
Chemical Name:
ethyl 4-amino-5-methylthieno[2,3-d]pyrimidine-6-carboxylate
CAS:
60598-74-5
MF:
C10H11N3O2S
Structure:
Chemical Name:
3,3'-Bi(1H-pyrazole)
CAS:
2384-02-3
MF:
C6H6N4
Structure:
Chemical Name:
CHEMBRDG-BB 6423830
CAS:
83490-13-5
MF:
C13H10N2O2
Structure:
Chemical Name:
1-CBZ-3-HYDROXYMETHYLPYRROLIDINE
CAS:
315718-05-9
MF:
C13H17NO3
Structure:
Chemical Name:
(R)-(+)-1-[(1-METHYL-2-PYRROLIDINYL)METHYL]PIPERIDINE
CAS:
155726-05-9
MF:
C11H22N2
Structure:
Chemical Name:
PPT
CAS:
263717-53-9
MF:
C24H22N2O3
Structure:
Chemical Name:
6-FLUOROPYRIDINE-2-SULFONYL CHLORIDE
CAS:
128583-07-3
MF:
C5H3ClFNO2S
Structure:
Chemical Name:
BENZO[4,5]IMIDAZO[1,2-A][1,3,5]TRIAZIN-2-YLAMINE
CAS:
61678-05-5
MF:
C9H7N5
Structure:
Chemical Name:
METHYL 2-(METHYLTHIO)PYRIMIDINE-4-CARBOXYLATE
CAS:
64224-67-5
MF:
C7H8N2O2S
Structure:
Chemical Name:
1-[(3S)-3-PYRROLIDINYL]-PIPERIDINE DIHYDROCHLORIDE
CAS:
917505-12-5
MF:
C9H19ClN2
Structure:
Chemical Name:
4-AMINO-5-BROMO-6-ETHOXYPICOLINIC ACID
CAS:
1057260-48-6
MF:
C8H9BrN2O3
Structure:
Chemical Name:
2,4-Dichloro-7-cyanoquinazoline
CAS:
864292-40-0
MF:
C9H3Cl2N3
Structure:
Chemical Name:
Pyrrolidine, 2-[bis[3,5-bis(trifluoromethyl)phenyl][(trimethylsilyl)oxy]methyl]-, (2R)-
CAS:
908303-26-4
MF:
C24H23F12NOSi
Structure:
Chemical Name:
2,4,6-Trichloro-pyrido[3,2-d]pyrimidine
CAS:
1036738-12-1
MF:
C7H2Cl3N3
Structure:
Chemical Name:
S)-2-((Methoxycarbonyl)aMino)-3-Methylbutanoic acid
CAS:
1255936-24-3
MF:
C13H14BrN3
Structure:
Chemical Name:
8-Azaspiro[Bicyclo[3.2.1]Octane-3,4'-Imidazolidine]-2',5'-Dione
CAS:
77398-55-1
MF:
C9H14ClN3O2
Structure:
Chemical Name:
trimorpholylmethane
CAS:
22630-09-7
MF:
C13H25N3O3
Structure:
Chemical Name:
2,5-Pyrrolidinedione, 1-[(4-chlorobenzoyl)oxy]-
CAS:
68388-09-0
MF:
C11H8ClNO4
Structure:
Chemical Name:
3-Pyrrolidinol, 5-[[[(1,1-dimethylethyl)dimethylsilyl]oxy]methyl]-, (3R,5S)-
CAS:
260417-94-5
MF:
C11H25NO2Si
Structure:
Chemical Name:
2,3-Dibromo-5,6,7,8-tetrahydroimidazo-[1,2-a]pyridine
CAS:
156817-73-1
MF:
C7H8Br2N2
Structure:
Chemical Name:
4-Chloro-7-isopropyl-7H-pyrrolo[2,3-d]pyrimidine
CAS:
870706-47-1
MF:
C9H10ClN3
Structure:
Chemical Name:
Thiazolo[4,5-d]pyrimidin-2-amine, 7-chloro-5-[[(1S)-1-phenylethyl]thio]-
CAS:
911820-08-1
MF:
C13H11ClN4S2
Structure:
Chemical Name:
2,4,6-tris(4-pyrazol-1-yl)-1,3,5-triazine
CAS:
27257-90-5
MF:
C12H9N9
Structure:
Chemical Name:
MK-8031
CAS:
1374248-81-3
MF:
C29H23F6N5O3
Structure:
Chemical Name:
4-Phenyl-2(3H)-thiazolone
CAS:
3884-31-9
MF:
C9H7NOS
Structure:
Chemical Name:
6-Nitroindazole
CAS:
7597-18-4
MF:
C7H5N3O2
Structure:
Chemical Name:
8-bromo-2-(trifluoromethyl)imidazo[1,2-a]pyridine
CAS:
1206981-68-1
MF:
C8H4BrF3N2
Structure:
Chemical Name:
5-CYCLOPROPYL-2H-PYRAZOL-3-YLAMINE
CAS:
175137-46-9
MF:
C6H9N3
Structure:
Chemical Name:
5-FLUORO-1H-BENZIMIDAZOLE-2-AMINE
CAS:
30486-73-8
MF:
C7H6FN3
Structure:
Chemical Name:
1,3-BIS(4-CHLOROPHENYL)IMIDAZOLIUM CHLORIDE
CAS:
141556-46-9
MF:
C15H11Cl3N2
Structure:
Chemical Name:
4-bromo-2,1,3-benzothiadiazole
CAS:
22034-13-5
MF:
C6H3BrN2S
Structure:
Chemical Name:
6-IODO-IMIDAZO[1,2-A]PYRIDINE-2-CARBOXYLIC ACID
CAS:
478040-59-4
MF:
C8H5IN2O2
Structure:
Chemical Name:
2,6-Bis[(4S)-phenyl-2-oxazolin-2-yl]pyridine
CAS:
174500-20-0
MF:
C23H19N3O2
Structure:
Chemical Name:
STYRENE MALEIC ANHYDRIDE COPOLYMER
CAS:
9011-13-6
MF:
C36H30O9X2
Structure:
Chemical Name:
4-(2-METHYLIMIDAZOL-1-YLMETHYL)PHENYLAMINE
CAS:
772311-98-5
MF:
C11H13N3
Structure:
Chemical Name:
2-(Aminomethyl)-1-Boc-piperidine
CAS:
370069-31-1
MF:
C11H22N2O2
Structure:
Chemical Name:
Imidazo[1,2-a]pyridin-7-ol
CAS:
896139-85-8
MF:
C7H6N2O
Structure:
Chemical Name:
1,3,5-Triazine
CAS:
290-87-9
MF:
C3H3N3
Structure:
Chemical Name:
2,4,6-trimethyl-1,3,5-triazine
CAS:
823-94-9
MF:
C6H9N3
Structure:
Chemical Name:
2α-Formylpyrrolidine-1-carboxylic acid benzyl ester
CAS:
71461-30-8
MF:
C13H15NO3
Structure:
Chemical Name:
Sulfuric acid, mono[(1R,2S,5R)-7-oxo-2-[[[(3S)-3-pyrrolidinyloxy]amino]carbonyl]-1,6-diazabicyclo[3.2.1]oct-6-yl] ester
CAS:
1452458-72-8
MF:
C11H18N4O7S
Structure:
Chemical Name:
Tramazoline
CAS:
1082-57-1
MF:
C13H17N3
Structure:
Chemical Name:
3-Amino-1-methylpiperidine dihydrochloride
CAS:
894808-73-2
MF:
C6H15ClN2
Structure:
Chemical Name:
(3S,4R)-1-benzyl-4-(4-fluorophenyl)pyrrolidine-3-carboxylic acid
CAS:
80909-49-5
MF:
C18H18FNO2
Structure:
Chemical Name:
(R)-2-hydroxy-N,N-dimethyl-3-(2-(1-(5-methylfuran-2-yl)propylamino)-3,4-dioxocyclobut-1-enylamino)benzamide
CAS:
473727-83-2
MF:
C21H23N3O5
Structure:
Chemical Name:
1-Pyrrolidinecarboxaldehyde, 2-oxo-
CAS:
40321-44-6
MF:
C5H7NO2
Structure:
Chemical Name:
6-chloropyrido[3,2-d]pyrimidin-4(3H)-one
CAS:
171178-33-9
MF:
C7H4ClN3O
Structure:
Chemical Name:
4-broMo-2-(2,6-dichlorophenyl)-7-fluoro-1H-iMidazo[4,5-c]pyridine
CAS:
1334411-83-4
MF:
C12H5BrCl2FN3
Structure:
Chemical Name:
5-BroMo-2-chloro-6-MethylpyriMidin-4-aMine
CAS:
54093-23-1
MF:
C5H5BrClN3
Structure:
Chemical Name:
3-(BroMoMethyl)-1H-pyrrolo[2,3-b]pyridine
CAS:
1174007-40-9
MF:
C8H7BrN2
Structure:
Chemical Name:
2-Chloro-4-(trifluoromethyl)nicotinonitrile
CAS:
896447-72-6
MF:
C7H2ClF3N2
Structure:
Chemical Name:
3-fluoro-6,7-dihydro-5H-pyrrolo[3,4-b]pyridine hydrochloride
CAS:
1346808-65-8
MF:
C7H8ClFN2
Structure:
Chemical Name:
TribroMocyanuric acid
CAS:
17497-85-7
MF:
C3Br3N3O3
Structure:
Chemical Name:
2-PYRROLIDIN-2-YLPYRIDINE
CAS:
22083-78-9
MF:
C9H12N2
Structure:
Chemical Name:
1-(3-HydroxyMethyl-pyrrolidin-1-yl)-ethanone
CAS:
191347-96-3
MF:
C7H13NO2
Structure:
Chemical Name:
Isopropyl-(4-Methyl-pyriMidin-2-yl)-aMine
CAS:
1341073-92-4
MF:
C8H13N3
Structure:
Chemical Name:
Ethyl 4-Methyl-2-(Methylthio)-6-oxo-1,6-dihydropyriMidine-5-carboxylate
CAS:
344361-90-6
MF:
C9H12N2O3S
Structure:
Chemical Name:
5-(2-AMinopropyl)indole
CAS:
3784-30-3
MF:
C11H14N2
Structure:
Chemical Name:
IMidazo[1,2-a]pyridin-8-aMine, 7-broMo-
CAS:
1357945-44-8
MF:
C7H6BrN3
Structure:
Chemical Name:
1,3-Pyrrolidinedicarboxylic acid, 4-oxo-, 1-(1,1-diMethylethyl) 3-Methyl ester
CAS:
194924-95-3
MF:
C11H17NO5
Structure:
Chemical Name:
tert-butyl octahydro-1H-pyrrolo[3,2-b]pyridine-1-carboxylate
CAS:
1211586-14-9
MF:
C12H22N2O2
Structure:
Chemical Name:
(S)-4-Oxo-4,6,7,8-tetrahydropyrrolo[1,2-a]pyrimidine-6-carboxylic acid
CAS:
1190392-22-3
MF:
C8H8N2O3
Structure:
Chemical Name:
1-Methyl-5-oxo-L-Proline
CAS:
52574-06-8
MF:
C6H9NO3
Structure:
Chemical Name:
3-(5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinolin-1-yl)-4-(1H-indol-3-yl)pyrrolidine-2,5-dione
CAS:
1239986-50-5
MF:
C23H19N3O2
Structure:
Chemical Name:
5-chloro-7-(3,4-diMethoxyphenyl)iMidazo[1,2-c]pyriMidine
CAS:
371171-20-9
MF:
C14H12ClN3O2
Structure:
Chemical Name:
BenzaMide, N-[2-[[(3R,4R)-1-[cis-4-(1,3-benzodioxol-5-yl)-4-hydroxycyclohexyl]-4-ethoxy-3-pyrrolidinyl]aMino]-2-oxoethyl]-3-(trifluoroMethyl)-, rel-
CAS:
1285539-85-6
MF:
C29H34F3N3O6
Structure:
Chemical Name:
2,4-Dichloro-6-isopropyl-5,6-dihydropyrrolo[3,4-d]pyriMidin-7-one
CAS:
1079649-94-7
MF:
C9H9Cl2N3O
Structure:
Chemical Name:
2,4-Dichloro-6-isopropyl-5,6-dihydropyrrolo[3,4-d]pyriMidin-7-one
CAS:
1079649-94-7
MF:
C9H9Cl2N3O
Structure:
Chemical Name:
2,4-Dichloro-6-isopropyl-5,6-dihydropyrrolo[3,4-d]pyriMidin-7-one
CAS:
1079649-94-7
MF:
C9H9Cl2N3O
Structure:
Chemical Name:
(2-BENZOTHIAZOLYLTHIO)ACETIC ACID
CAS:
6295-57-4
MF:
C9H7NO2S2
Structure:
Chemical Name:
3-[[3,5-bis(trifluoroMethyl)phenyl]aMino]-4-[[(1S,2S)-2-(1-pyrrolidinyl)cyclohexyl]aMino]-
CAS:
1211565-10-4
MF:
C22H23F6N3O2
Structure:
Chemical Name:
2,5-Pyrrolidinedione, 3-(5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinolin-1-yl)-4-(1H-indol-3-yl)-, (3R,4R)-rel-
CAS:
905853-99-8
MF:
C23H19N3O2
Structure:
Chemical Name:
CyclopentaneMethanol, 4-(4-chloro-7H-pyrrolo[2,3-d]pyriMidin-7-yl)-2-hydroxy-, (1S,2S,4R)-
CAS:
1113025-27-6
MF:
C12H14ClN3O2
Structure:
Chemical Name:
1-Ethyl-1H-iMidazole-5-carboxylic acid
CAS:
71925-11-6
MF:
C6H8N2O2
Structure:
Chemical Name:
4-Hydroxy-6-Methyl-2-oxo-1,2-dihydro-pyridine-3-carbonitrile
CAS:
67643-17-8
MF:
C7H6N2O2
Structure:
Chemical Name:
N-[3,5-bis(trifluoroMethyl)phenyl]-N'-[(1R,2R)-2-(1-pyrrolidinyl)cyclohexyl]-Thiourea
CAS:
1314743-49-1
MF:
C19H23F6N3S
Structure:
Chemical Name:
L-Proline sodiuM salt
CAS:
15383-56-9
MF:
C5H10NNaO2
Structure:
Chemical Name:
1H-BenziMidazole-1-acetaMide, 2-phenyl-N-(phenylMethyl)-α-4-piperidinyl-
CAS:
1440753-53-6
MF:
C27H28N4O
Structure:
Chemical Name:
4-Methyl-2-(4,4,5,5-tetraMethyl-1,3,2-dioxaborolan-2-yl)-benzonitrile
CAS:
863868-22-8
MF:
C14H18BNO2
Structure:
Chemical Name:
5-(Pyrrolidin-1-yl)pentan-1-aMine dihydrochloride
CAS:
1624260-73-6
MF:
C9H22Cl2N2
Structure:
Chemical Name:
(2S)-2-(3-BROMOPHENYL)PYRROLIDINE
CAS:
1217694-15-9
MF:
C10H12BrN
Structure:
Chemical Name:
2-AMino-3-(pyrrolidin-3-yl)propanoic acid
CAS:
1313016-75-9
MF:
C7H14N2O2
Structure:
Chemical Name:
6-Methoxy-iMidazo[1,2-b]pyridazine-2-carboxylic acid
CAS:
64068-09-3
MF:
C8H7N3O3
Structure:
Chemical Name:
4,4',4''-(1,3,5-Triazine-2,4,6-triyl)trianiline
CAS:
14544-47-9
MF:
C21H18N6
Structure:
Chemical Name:
1-Ethyl-3-methylimidazolium bis(fluorosulfonyl)imide
CAS:
235789-75-0
MF:
C6H11F2N3O4S2
Structure:
Chemical Name:
4-Bromo-1-pyrrolidin-3-yl-1H-pyrazole
CAS:
1247439-25-3
MF:
C7H10BrN3