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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
1H-Pyrrolo[1,2-a]imidazole
CAS:
251-75-2
MF:
C6H6N2
Structure:
Chemical Name:
Alflutinib
CAS:
1869057-83-9
MF:
C28H31F3N8O2
Structure:
Chemical Name:
1-(4-FLUOROPHENYL)IMIDAZOLINE-2-THIONE
CAS:
17452-07-2
MF:
C9H7FN2S
Structure:
Chemical Name:
3-methyl-1H-1,2,4-triazole-5-thiol
CAS:
7271-44-5
MF:
C3H5N3S
Structure:
Chemical Name:
Perfluorophenyl 3-(pyridin-2-yldisulfanyl)propanoate
CAS:
160580-70-1
MF:
C14H8F5NO2S2
Structure:
Chemical Name:
1,3,7-TRIAZA-SPIRO[4.5]DECANE-2,4-DIONE
CAS:
78222-09-0
MF:
C7H11N3O2
Structure:
Chemical Name:
4-CHLORO-2-METHYLTHIOPYRAZOLO[1,5-A]1,3,5-TRIAZINE
CAS:
54346-19-9
MF:
C6H5ClN4S
Structure:
Chemical Name:
L-CIS-PYRROLIDINE-2,4-DICARBOXYLIC ACID
CAS:
64927-38-4
MF:
C6H9NO4
Structure:
Chemical Name:
RPA 202248
CAS:
143701-75-1
MF:
C15H12F3NO4S
Structure:
Chemical Name:
1-Bromo-7-chlorodibenzo[b,d]furan
CAS:
2173555-52-5
MF:
C12H6BrClO
Structure:
Chemical Name:
8-bromo-5-methyl-[1,2,4]triazolo[4,3-a]pyridine
CAS:
1379355-21-1
MF:
C7H6BrN3
Structure:
Chemical Name:
Mc-Val-Cit-PAB-Cl
CAS:
1639351-92-0
MF:
C28H39ClN6O6
Chemical Name:
(1R,2S,3S)-2-ethoxymethyl-3-(3,4-dichlorophenyl)-tropane
Structure:
Chemical Name:
10-chloronaphtho[2,1-b]benzofuran
CAS:
2140822-95-1
MF:
C16H9ClO
Structure:
Chemical Name:
3-bromo-7-chlorodibenzo[b,d]furan
CAS:
2244910-28-7
MF:
C12H6BrClO
Structure:
Chemical Name:
[4,4'-Bi-1,3-dioxolane]-2,2'-dione
CAS:
36205-45-5
MF:
C6H6O6
Structure:
Chemical Name:
1-((1H-pyrazol-1-yl)methyl)-1H-pyrazole
CAS:
27258-04-4
MF:
C7H8N4
Structure:
Chemical Name:
6-(Tert-butylsulfonyl)-3-iodo-7-methoxyimidazo[1,2-a]pyridine
CAS:
2141961-59-1
MF:
C12H15IN2O3S
Structure:
Chemical Name:
7-Bromo-4H-pyrazino[1,2-a]pyrimidin-4-one
CAS:
1848244-17-6
MF:
C7H4BrN3O
Structure:
Chemical Name:
6-(2,2,2-Trifluoroethyl)thieno[3,2-d]pyrimidin-4(3H)-one
CAS:
2163771-86-4
MF:
C8H5F3N2OS
Structure:
Chemical Name:
1-tert-Butyl 3-methyl 3-(methylthio)pyrrolidine-1,3-dicarboxylate
CAS:
942190-28-5
MF:
C12H21NO4S
Structure:
Chemical Name:
(1-(pyrrolidin-1-ylmethyl)cyclopropyl)methanol
CAS:
1174666-14-8
MF:
C9H17NO
Structure:
Chemical Name:
3-Iodo-1H-indazole
CAS:
66607-27-0
MF:
C7H5IN2
Structure:
Chemical Name:
4-Formylmorpholine
CAS:
4394-85-8
MF:
C5H9NO2
Structure:
Chemical Name:
2-PIPERIDIN-2-YL-1H-BENZOIMIDAZOLE
CAS:
51785-23-0
MF:
C12H15N3
Structure:
Chemical Name:
2,6-Bis[(4R)-4-phenyl-2-oxazolinyl]pyridine
CAS:
128249-70-7
MF:
C23H19N3O2
Structure:
Chemical Name:
3-(2-HYDROXY-5-METHYLPHENYL)PYRAZOLE
CAS:
57148-86-4
MF:
C10H10N2O
Structure:
Chemical Name:
1,3-DI-TERT-BUTYLBENZIMIDAZOLIUM CHLORIDE
CAS:
946607-10-9
MF:
C15H23ClN2
Structure:
Chemical Name:
1,3-DI-TERT-BUTYLBENZIMIDAZOLIUM CHLORIDE
CAS:
946607-10-9
MF:
C15H23ClN2
Structure:
Chemical Name:
N-[[(1,2,3,5,6,7-hexahydro-s-indacen-4-yl) amino]carbonyl]-1-(1-methylethyl)-1H-Pyrazole-3-sulfonamide
CAS:
1995067-59-8
MF:
C19H24N4O3S
Structure:
Chemical Name:
Pyrimidine,5,5'-(1,4-phenylene)bis-
CAS:
174303-53-8
MF:
C14H10N4
Structure:
Chemical Name:
1,2,4-Triazolo[4,3-c]pyrimidine, 5-chloro-8-iodo-
CAS:
2374137-45-6
MF:
C5 H2 Cl I N4
Structure:
Chemical Name:
1H-Benzimidazole, 2-(3,5-dibromophenyl)-
CAS:
1242080-87-0
MF:
C13H8Br2N2
Structure:
Chemical Name:
(3S,4R)-4-(3-fluorophenyl)-1-(2-methoxyethyl)pyrrolidin-3-aminedihydrochloride
CAS:
1414567-41-1
MF:
C13H20ClFN2O
Structure:
Chemical Name:
1-(4-fluoro-2-methylphenyl)pyrrolidine-2,4-dione
CAS:
1537294-18-0
MF:
C11H10FNO2
Structure:
Chemical Name:
AKOS BC-0114
CAS:
373824-30-7
MF:
C12H18N2O
Structure:
Chemical Name:
2H-Benzimidazol-2-one, 4-bromo-7-fluoro-1,3-dihydro-
CAS:
1388074-82-5
MF:
C7H4BrFN2O
Structure:
Chemical Name:
1H-Benzimidazole-7-carboxylic acid, 5-bromo-, methyl ester
CAS:
1806517-50-9
MF:
C9H7BrN2O2
Structure:
Chemical Name:
2-Pyrrolidinone, 3-bromo-1-(1,1-dimethylethyl)-
CAS:
1343578-30-2
MF:
C8H14BrNO
Structure:
Chemical Name:
1,1'-((2,3,5,6-tetramethyl-1,4-phenylene)bis(methylene))bis(1H-imidazole)
CAS:
1012075-54-5
MF:
C18H22N4
Structure:
Chemical Name:
9H-Carbazole, 9,9'-[6-[3-(triphenylsilyl)phenyl]-1,3,5-triazine-2,4-diyl]bis-
CAS:
2422045-58-5
MF:
C51H35N5Si
Structure:
Chemical Name:
4-OXAZOLEMETHANOL, 2-METHYL-
CAS:
141567-53-5
MF:
C5H7NO2
Structure:
Chemical Name:
2-ETHYL-2-ADAMANTYL ACRYLATE
CAS:
303186-14-3
MF:
C15H22O2
Structure:
Chemical Name:
5-PYRIDIN-3-YLTHIOPHEN-2-AMINE
CAS:
837376-58-6
MF:
C9H8N2S
Structure:
Chemical Name:
2,4(1H,3H)-Pyrimidinedione, 1-(4-bromo-3-fluorophenyl)dihydro-
CAS:
1515197-90-6
MF:
C10H8BrFN2O2
Structure:
Chemical Name:
2,4(1H,3H)-Pyrimidinedione, 1-cyclobutyl-
CAS:
1797409-28-9
MF:
C8H10N2O2
Structure:
Chemical Name:
D-erythro-Pentofuranose, 2-deoxy-4-C-ethynyl-, 1-acetate 3,5-bis(4-methylbenzoate)
CAS:
2072080-28-3
MF:
C25H24O7
Structure:
Chemical Name:
1-Propanone, 1-[4-chloro-7-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-indol-1-yl]-2,2-dimethyl-
CAS:
2390149-19-4
MF:
C19H25BClNO3
Structure:
Chemical Name:
4,4'-(4,5,6,7-tetrabromo-3H-2,1-benzoxathiol-3-ylidene)bis[2,6-dichlorophenol] S,S-dioxide
CAS:
61053-97-2
MF:
C19H6Br4Cl4O5S
Structure:
Chemical Name:
ethyl pyrrolidine-1-propionate
CAS:
6317-35-7
MF:
C9H17NO2
Structure:
Chemical Name:
1-(tributylstannyl)-1H-imidazole
CAS:
27605-35-2
MF:
C15H30N2Sn
Structure:
Chemical Name:
5-[(3-ethylnaphth[2,1-d]oxazol-2(3H)-ylidene)ethylidene]-3-heptyl-1-phenyl-2-thioxoimidazolidin-4-one
CAS:
13242-16-5
MF:
C31H33N3O2S
Structure:
Chemical Name:
Carbamic acid, [(1S)-3-chloro-2-oxo-1-[[(3S)-2-oxo-3-pyrrolidinyl]methyl]propyl]-, 1,1-dimethylethyl ester (9CI)
CAS:
870153-92-7
MF:
C13H21ClN2O4
Structure:
Chemical Name:
1-(2,2-diethoxyethyl)-1H-imidazole
CAS:
18999-43-4
MF:
C9H16N2O2
Structure:
Chemical Name:
3,5-DIMETHYL-4H-1,2,4-TRIAZOLE
CAS:
7343-34-2
MF:
C4H7N3
Structure:
Chemical Name:
Dimiracetam
CAS:
126100-97-8
MF:
C6H8N2O2
Structure:
Chemical Name:
NSC46839
CAS:
14700-62-0
MF:
C10H10N2
Structure:
Chemical Name:
4,5-Dihydro-2-(1,2,3,4-tetrahydro-1-naphthalenyl)-1H-imidazole mononitrate
CAS:
118201-38-0
MF:
C13H17N3O3
Structure:
Chemical Name:
4-Pyridinepropanenitrile,beta-hydroxy-,(betaS)-(9CI)
CAS:
676563-19-2
MF:
C8H8N2O
Structure:
Chemical Name:
1-Methyl-1H-pyrazole-4-carbonitrile
CAS:
66121-71-9
MF:
C5H5N3
Chemical Name:
MeO-4PACz
CAS:
2922526-56-3
Structure:
Chemical Name:
ETHYL 2,7-DIMETHYLIMIDAZO[1,2-A]PYRIDINE-3-CARBOXYLATE
CAS:
81448-48-8
MF:
C12H14N2O2
Structure:
Chemical Name:
4-Chloro-1-methylpyrazole
CAS:
35852-81-4
MF:
C4H5ClN2
Structure:
Chemical Name:
2-Adamantanone oxime
CAS:
4500-12-3
MF:
C10H15NO
Structure:
Chemical Name:
(R)-(-)-3-FLUOROPYRROLIDINE HYDROCHLORIDE
CAS:
136725-55-8
MF:
C4H9ClFN
Structure:
Chemical Name:
4-Bromoindole
CAS:
52488-36-5
MF:
C8H6BrN
Structure:
Chemical Name:
FLAG peptide
CAS:
98849-88-8
MF:
C41H60N10O20
Chemical Name:
TRIAZOLOPYRIDAZINE
Structure:
Chemical Name:
Gentioflavine
CAS:
18058-50-9
MF:
C10H11NO3
Structure:
Chemical Name:
CIS-2,6-PIPERIDINE DICARBOXYLIC ACID
CAS:
59234-40-1
MF:
C7H11NO4
Structure:
Chemical Name:
C-IMIDAZO[1,2-A]PYRIDIN-3-YL-METHYLAMINE
CAS:
160771-89-1
MF:
C8H9N3
Structure:
Chemical Name:
5-IODO-1-METHYL-1H-PYRAZOLE
CAS:
34091-51-5
MF:
C4H5IN2
Structure:
Chemical Name:
1,4,5-TRIPHENYL-1H-IMIDAZOLE-2-THIOL
CAS:
2349-59-9
MF:
C21H16N2S
Structure:
Chemical Name:
6-Hydroxy-2-(methylsulfanyl)-4-pyrimidinecarboxylic acid
CAS:
6314-14-3
MF:
C6H6N2O3S
Structure:
Chemical Name:
8-BROMO2-METHYL-[1,2,4]TRIAZOLO[1,5-A]PYRIDINE
CAS:
7169-96-2
MF:
C7H6BrN3
Structure:
Chemical Name:
6-BROMO-4-IODO-1H-INDAZOLE
CAS:
885519-41-5
MF:
C7H4BrIN2
Structure:
Chemical Name:
4-METHYL-1H-IMIDAZOLE-2-CARBOXYLICACID
CAS:
70631-93-5
MF:
C5H6N2O2
Structure:
Chemical Name:
3-BENZOYL-7-DIETHYLAMINOCOUMARIN
CAS:
77016-78-5
MF:
C20H19NO3
Structure:
Chemical Name:
2,6-DIBROMOBENZALDEHYDE
CAS:
67713-23-9
MF:
C7H4Br2O
Structure:
Chemical Name:
3,5-dichloro-2-(trichloromethyl)pyridine
CAS:
1128-16-1
MF:
C6H2Cl5N
Structure:
Chemical Name:
ethyl 4-acetylphenylacetate
CAS:
1528-42-3
MF:
C12H14O3
Structure:
Chemical Name:
Imidazo[1,2-b]pyridazine, 6-chloro-8-fluoro-
CAS:
2306272-97-7
MF:
C6H3ClFN3
Structure:
Chemical Name:
Uridine 5'-(trihydrogen diphosphate), mono-alpha-d-glucopyranosyl ester, sodium salt
CAS:
14656-80-5
MF:
C15H25N2NaO17P2
Structure:
Chemical Name:
1-(2-chloroethyl)pyrrolidine-2,5-dione
CAS:
41212-96-8
MF:
C6H8ClNO2
Structure:
Chemical Name:
4-methylimidazolidin-2-one
CAS:
6531-31-3
MF:
C4H8N2O
Structure:
Chemical Name:
(R)-1-N-Boc-2-(hydroxymethyl)piperazine
CAS:
169448-87-7
MF:
C10H20N2O3
Structure:
Chemical Name:
6-(Pyrrolidin-1-yl)pyridine-2-carbonitrile
CAS:
160017-13-0
MF:
C10H11N3
Structure:
Chemical Name:
(R)-4-iodo-1-(pyrrolidin-3-yl)-1H-pyrazole hydrochloride
CAS:
2828444-26-2
MF:
C7H11ClIN3
Structure:
Chemical Name:
Pyrazolo[1,5-a]pyridine-3-carbonitrile, 4-fluoro- (ACI)
CAS:
2106691-83-0
MF:
C8H4FN3
Structure:
Chemical Name:
endo-N-Phenzyl-endo-3-aminotropane
CAS:
36795-88-7
MF:
C14H20N2
Structure:
Chemical Name:
Thieno[3,2-d]pyrimidine, 4-methoxy-7-methyl- (9CI)
CAS:
676549-71-6
MF:
C8H8N2OS
Structure:
Chemical Name:
Imidazo[1,2-a]pyridine, 3-fluoro-7-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-
CAS:
2259877-52-4
MF:
C13H16BFN2O2
Structure:
Chemical Name:
Imidazo[1,2-a]pyridine, 7-fluoro-3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-
CAS:
2628351-34-6
MF:
C13H16BFN2O2
Structure:
Chemical Name:
1-(tert-butyl) 2-methyl (2S,4R)-4-((4,4''-diamino-5'-(4-aminophenyl)-[1,1':3',1''-terphenyl]-4'-yl)methoxy)pyrrolidine-1,2-dicarboxylate
CAS:
2116475-70-6
MF:
C36H40N4O5
Structure:
Chemical Name:
(4R)-1-BOC-4-METHYL-D-PROLINE
CAS:
871727-77-4
MF:
C11H19NO4
Chemical Name:
3-iodo-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridine dihydrochloride
Structure:
Chemical Name:
5-BROMO-2,4-DIMETHYL-1,3-THIAZOLE
CAS:
28599-52-2
MF:
C5H6BrNS
Structure:
Chemical Name:
1H-Pyrazole-4-carboxaldehyde, 1-[2-[[2-methoxy-4-(4-morpholinyl)-5-nitrophenyl]amino]-4-pyrimidinyl]-3-phenyl-
CAS:
1903010-39-8
MF:
C25H23N7O5
Structure:
Chemical Name:
5-Formylamino-1-(2-formyloxyethyl)pyrazole
MF:
C7H9N3O3
Structure:
Chemical Name:
4-(Iodomethyl)tetrahydro-2H-pyran
CAS:
101691-94-5
MF:
C6H11IO