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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
2-CHLORO-3-IODO-5-PICOLINE
CAS:
59782-91-1
MF:
C6H5ClIN
Structure:
Chemical Name:
2,4,6(1H,3H,5H)-Pyrimidinetrione, 5-methyl- (9CI)
CAS:
2417-22-3
MF:
C5H6N2O3
Structure:
Chemical Name:
4-Pyrimidinecarbonitrile, 2-(dimethylamino)- (9CI)
CAS:
79605-00-8
MF:
C7H8N4
Structure:
Chemical Name:
1H-BENZIMIDAZOL-7-AMINE
CAS:
4331-29-7
MF:
C7H7N3
Structure:
Chemical Name:
1-(tert-butyl) 2-methyl (2S,4R)-4-((4,4''-diamino-5'-(4-aminophenyl)-[1,1':3',1''-terphenyl]-4'-yl)oxy)pyrrolidine-1,2-dicarboxylate
CAS:
2116475-69-3
MF:
C35H38N4O5
Chemical Name:
2-chloro-3-methoxy-4-(1-((2-(trimethylsilyl)ethoxy)methyl)-1H-1,2,4-triazol-3-yl)pyridine
Chemical Name:
Fenoxazoline
Structure:
Chemical Name:
Midodrine hydrochloride
CAS:
3092-17-9
MF:
C12H19ClN2O4
Structure:
Chemical Name:
P-(2-BENZOXAZOLYL)BENZYL CHLORIDE
CAS:
57864-19-4
MF:
C14H10ClNO
Structure:
Chemical Name:
6-methyl-1H-indole-2,3-dione
CAS:
1128-44-5
MF:
C9H7NO2
Structure:
Chemical Name:
5-Chloro-2-methoxy-4-methylpyridine
CAS:
851607-29-9
MF:
C7H8ClNO
Structure:
Chemical Name:
3-IODO-4-METHOXY-PYRIDINE
CAS:
89640-55-1
MF:
C6H6INO
Structure:
Chemical Name:
1H-Benzimidazole,5-chloro-2-propyl-(9CI)
CAS:
4887-91-6
MF:
C10H11ClN2
Structure:
Chemical Name:
7H-Pyrrolo[1,2-c]imidazol-7-one,5,6-dihydro-(9CI)
CAS:
426219-43-4
MF:
C6H6N2O
Structure:
Chemical Name:
1H-Benzimidazol-2-amine,5-chloro-6-fluoro-(9CI)
CAS:
142356-64-7
MF:
C7H5ClFN3
Structure:
Chemical Name:
1H-Imidazole-5-carboxylicacid,1-(1-methylethyl)-(9CI)
CAS:
105293-81-0
MF:
C7H10N2O2
Structure:
Chemical Name:
4-CHLORO-2-PHENYLQUINAZOLINE
CAS:
6484-25-9
MF:
C14H9ClN2
Structure:
Chemical Name:
6-bromo-5-methyl-1H-imidazo[4,5-b]pyridine
CAS:
28279-41-6
MF:
C7H6BrN3
Structure:
Chemical Name:
2-Aminobenzothiazole-6-carboxylic acid
CAS:
93-85-6
MF:
C8H6N2O2S
Structure:
Chemical Name:
(S,R,S)-AHPC-PEG2-acid
CAS:
2172820-09-4
MF:
C30H42N4O8S
Structure:
Chemical Name:
ethyl 7-[(2R)-2-(hydroxymethyl)-5-oxo-1-pyrrolidinyl]heptanoate
CAS:
346672-97-7
MF:
C14H25NO4
Structure:
Chemical Name:
Urea, N-[(3S,4R)-4-(3-fluorophenyl)-1-(2-methoxyethyl)-3-pyrrolidinyl]-N'-[4-methyl-3-(2-methyl-5-pyrimidinyl)-1-phenyl-1H-pyrazol-5-yl]-
CAS:
1824664-89-2
MF:
C29H32FN7O2
Structure:
Chemical Name:
(S)-5-methyl-2-(pyrrolidin-2-yl)pyridine
CAS:
1213645-44-3
MF:
C10H14N2
Structure:
Chemical Name:
(S)-ALPHA,ALPHA-BIS(4-METHOXYPHENYL)-2-PYRROLIDINEMETHANOL
CAS:
131180-57-9
MF:
C19H23NO3
Structure:
Chemical Name:
3,5,6-Trichloro-1,2,4-triazine
CAS:
873-41-6
MF:
C3Cl3N3
Structure:
Chemical Name:
(-)-Menthyl (+)-2-pyrrolidone-5-carboxylate
CAS:
68127-22-0
MF:
C15H25NO3
Structure:
Chemical Name:
N-(6-amino-1,2,3,4-tetrahydro-1-methyl-2,4-dioxo-5-pyrimidinyl)formamide
CAS:
14785-95-6
MF:
C6H8N4O3
Structure:
Chemical Name:
2,4,5-trimethylpyridine
CAS:
1122-39-0
MF:
C8H11N
Structure:
Chemical Name:
4-methyloxazole
CAS:
693-93-6
MF:
C4H5NO
Structure:
Chemical Name:
5-(Hydroxymethyl)-1-methyl-1H-pyrazole
CAS:
84547-61-5
MF:
C5H8N2O
Structure:
Chemical Name:
Dimethylmethoxy chromanol
CAS:
83923-51-7
MF:
C12H16O3
Structure:
Chemical Name:
2,2'-Bi-1H-imidazole, 4,4',5,5'-tetrahydro-4,4'-bis(1-methylethyl)-1,1'-bis(3-methylphenyl)-, (4S,4'S)-
CAS:
2374958-85-5
MF:
C26H34N4
Structure:
Chemical Name:
2,2'-Bi-1H-imidazole, 4,4',5,5'-tetrahydro-4,4'-bis(1-methylethyl)-1,1'-bis(3-methylphenyl)-, (4S,4'S)-
CAS:
2374958-85-5
MF:
C26H34N4
Structure:
Chemical Name:
Pyrrolidine, 4-fluoro-2-methyl-, hydrochloride (1:1), (2R,4R)-
CAS:
2300174-87-0
MF:
C5H11ClFN
Structure:
Chemical Name:
6-BROMO-2,4-DICHLOROQUINAZOLINE
CAS:
102393-82-8
MF:
C8H3BrCl2N2
Structure:
Chemical Name:
Imidazo[1,2-a]pyridine-2-carboxaldehyde, 8-methyl- (9CI)
CAS:
143982-39-2
MF:
C9H8N2O
Structure:
Chemical Name:
Quinazoline, 4-methyl- (6CI,7CI,8CI,9CI)
CAS:
700-46-9
MF:
C9H8N2
Structure:
Chemical Name:
3-Pyrrolidinol, 3-[(3-bromo-5-fluorophenyl)methyl]-
CAS:
1515119-28-4
MF:
C11H13BrFNO
Structure:
Chemical Name:
1-Propanone, 1-(2-pyrimidinyl)- (9CI)
CAS:
54643-09-3
MF:
C7H8N2O
Structure:
Chemical Name:
2-Pyrrolidinecarbonitrile, 1-(chloroacetyl)- (9CI)
CAS:
274901-37-0
MF:
C7H9ClN2O
Structure:
Chemical Name:
1-(3,4-dimethyl-1H-pyrazol-1-yl)ethan-1-one
CAS:
856064-45-4
MF:
C7H10N2O
Chemical Name:
Sodium benzotriazole
Structure:
Chemical Name:
Pyrrolidinone, dimethyl-
CAS:
60544-40-3
Structure:
Chemical Name:
4(5)-CYANOMETHYLIMIDAZOLE
CAS:
18502-05-1
MF:
C5H5N3
Structure:
Chemical Name:
1H-1,2,3-TRIAZOLE, 4-BROMO-1-METHYL-
CAS:
13273-53-5
MF:
C3H4BrN3
Structure:
Chemical Name:
3-CYCLOPENTYLACRYLONITRILE
CAS:
591769-05-0
MF:
C8H11N
Structure:
Chemical Name:
4-METHYL-1H-1,2,3-TRIAZOLE
CAS:
27808-16-8
MF:
C3H5N3
Structure:
Chemical Name:
4-Amino-8-bromo-2-chloroquinazoline
CAS:
956100-62-2
MF:
C8H5BrClN3
Structure:
Chemical Name:
Ethyl 3-amino-6-(trifluoromethyl)imidazo-[1,2-a]pyridine-2-carboxylate
CAS:
1171919-18-8
MF:
C11H10F3N3O2
Structure:
Chemical Name:
4,5-Dichloro-1H-pyrrolo[2,3-b]pyridine
CAS:
1142192-58-2
MF:
C7H4Cl2N2
Structure:
Chemical Name:
(2S,4R)-1-Boc-2-cyano-4-hydroxypyrrolidine
CAS:
483366-12-7
MF:
C10H16N2O3
Structure:
Chemical Name:
3-Cyano-4-methylphenylboronic acid, pinacol ester
CAS:
1220219-11-3
MF:
C14H18BNO2
Structure:
Chemical Name:
(S)-tert-butyl 2-(1H-imidazol-2-yl)pyrrolidine-1-carboxylate
CAS:
1007882-58-7
MF:
C12H19N3O2
Structure:
Chemical Name:
4-bromooxazole
CAS:
1240598-57-5
MF:
C3H2BrNO
Structure:
Chemical Name:
3-(4-Pyridine)acrylic acid
CAS:
84228-93-3
MF:
C8H7NO2
Structure:
Chemical Name:
1-tert-Butyl-4-iodo-1H-pyrazole
CAS:
1354705-41-1
MF:
C7H11IN2
Structure:
Chemical Name:
1-(azetidin-3-yl)-4-iodo-1H-pyrazole
CAS:
1343072-59-2
MF:
C6H8IN3
Structure:
Chemical Name:
6-CHLORO-2-PHENYLIMIDAZO[1,2-A]PYRIDINE-3-CARBOXYLIC ACID
CAS:
220465-51-0
MF:
C14H9ClN2O2
Structure:
Chemical Name:
1,3-DIMETHYL-4-NITRO-1H-PYRAZOLE
CAS:
3920-38-5
MF:
C5H7N3O2
Structure:
Chemical Name:
7-BROMO-1H-INDOLE-3-CARBALDEHYDE
CAS:
115666-21-2
MF:
C9H6BrNO
Structure:
Chemical Name:
6-AZACYTOSINE
CAS:
931-85-1
MF:
C3H4N4O
Structure:
Chemical Name:
2-OXO-PYRROLIDINE-3-CARBOXYLIC ACID ETHYL ESTER
CAS:
36821-26-8
MF:
C7H11NO3
Structure:
Chemical Name:
3,5-DIMETHYL-4-NITROISOXAZOLE
CAS:
1123-49-5
MF:
C5H6N2O3
Structure:
Chemical Name:
Benzyl (2R,4S)-4-amino-2-methylpyrrolidine-1-carboxylate
CAS:
2165506-16-9
MF:
C13H18N2O2
Structure:
Chemical Name:
6'-Bromo-8'-chloro-1',5'-dioxo-1',5'-dihydro-2'H-spiro[cyclohexane-1,3'-imidazo[1,5-a]pyridine]-4-carbonitrile
CAS:
1849593-46-9
MF:
C13H11BrClN3O2
Structure:
Chemical Name:
5-[1-(hydroxyimino)ethyl]-4-methylpyrimidin-2-amine
CAS:
1050886-14-0
MF:
C7H10N4O
Structure:
Chemical Name:
2-BROMO-4-METHYL-1H-IMIDAZOLE
CAS:
23328-88-3
MF:
C4H5BrN2
Structure:
Chemical Name:
1-(3,4,5-Trihydroxypentanoyl)-β-carboline
CAS:
180995-40-8
MF:
C16H16N2O4
Structure:
Chemical Name:
(6-Methyl-1H-benzimidazol-2-yl)methanol
CAS:
20034-02-0
MF:
C9H10N2O
Structure:
Chemical Name:
4-(2-bromoethyl)pyridine hydrobromide
CAS:
120277-01-2
MF:
C7H9Br2N
Structure:
Chemical Name:
1-{[(tert-butoxy)carbonyl]amino}-5-oxopyrrolidine-3-carboxylic acid
CAS:
1354952-07-0
MF:
C10H16N2O5
Structure:
Chemical Name:
Terevalefim
CAS:
1070881-42-3
MF:
C9H8N2S
Structure:
Chemical Name:
1,3-DIMETHYL-1H-PYRAZOLE-5-CARBONITRILE
CAS:
306936-77-6
MF:
C6H7N3
Structure:
Chemical Name:
2-{5H,6H,7H,8H,9H-[1,2,4]triazolo[4,3-a]azepin-3-yl}pyrrolidine
CAS:
923690-18-0
MF:
C11H18N4
Structure:
Chemical Name:
4-chloro-6-(2,2,2-trifluoroethyl)thieno[3,2-d]pyrimidine
CAS:
2102553-51-3
MF:
C8H4ClF3N2S
Structure:
Chemical Name:
Fluclotizolam
CAS:
54123-15-8
MF:
C15H10ClFN4S
Structure:
Chemical Name:
4-Pyrimidinamine, 5,6-dichloro-N-methyl-
CAS:
1428252-93-0
MF:
C5H5Cl2N3
Structure:
Chemical Name:
2-(6-Methoxy-naphthalen-1-yl)-4,4,5,5-tetramethyl-[1,3,2]dioxaborolane
CAS:
588717-94-6
MF:
C17H21BO3
Structure:
Chemical Name:
(2,5-dioxopyrrolidin-1-yl) (2R)-2-[(2-methylpropan-2-yl)oxycarbonylamino]-5-(phenylmethoxycarbonylamino)pentanoate
CAS:
57225-26-0
MF:
C22H29N3O8
Structure:
Chemical Name:
Ethyl 1-Methyl-2,4-dioxo-1H,2H,3H,4H-pyrido[2,3-d]pyrimidine-7-carboxylate
CAS:
1000932-39-7
MF:
C11H11N3O4
Structure:
Chemical Name:
5-(Benzyloxy)-1,2-dimethyl-6-oxo-1,6-dihydropyrimidine-4-carboxylic acid
CAS:
389130-68-1
MF:
C14H14N2O4
Structure:
Chemical Name:
4-(propan-2-yl)pyrimidin-5-amine dihydrochloride
CAS:
2241139-74-0
MF:
C7H12ClN3
Structure:
Chemical Name:
1,3-Dioxolane
CAS:
646-06-0
MF:
C3H6O2
Structure:
Chemical Name:
5-ISOXAZOLEMETHANOL
CAS:
98019-60-4
MF:
C4H5NO2
Structure:
Chemical Name:
Boron trifluoride tetrahydrofuran complex
CAS:
462-34-0
MF:
C4H8BF3O
Structure:
Chemical Name:
Oxazole-4-carbonitrile
CAS:
55242-84-7
MF:
C4H2N2O
Structure:
Chemical Name:
PYRROLO[1,2-F][1,2,4]TRIAZIN-4-AMINE
CAS:
159326-68-8
MF:
C6H6N4
Structure:
Chemical Name:
OXOTREMORINE SESQUIFUMARATE
CAS:
17360-35-9
MF:
C36H48N4O14
Structure:
Chemical Name:
2,4,4-TRIMETHYL-2-OXAZOLINE
CAS:
1772-43-6
MF:
C6H11NO
Structure:
Chemical Name:
4-Thiazolecarboxylic acid
CAS:
3973-08-8
MF:
C4H3NO2S
Structure:
Chemical Name:
2-ISOPROPYL-4(5)-NITROIMIDAZOLE
CAS:
13373-32-5
MF:
C6H9N3O2
Chemical Name:
(2R,4S)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-((S)-1-(4-(4-methylthiazol-5-yl)phenyl)ethyl)pyrrolidine-2-carboxamide hydrochloride
Structure:
Chemical Name:
2H-IMIDAZO[4,5-B]PYRAZIN-2-ONE, 1,3-DIHYDRO-
CAS:
16328-63-5
MF:
C5H4N4O
Structure:
Chemical Name:
(S)-2-[(Diphenylphosphino)methyl]pyrrolidine, min. 97%
CAS:
60261-46-3
MF:
C17H20NP
Structure:
Chemical Name:
7-chloro-2-(chloromethyl)-4H-pyrido[1,2-a]pyrimidin-4-one(SALTDATA: FREE)
CAS:
162469-87-6
MF:
C9H6Cl2N2O
Structure:
Chemical Name:
1,3-Dicyclohexylbenzimidazolium chloride, min. 97%
CAS:
1034449-15-4
MF:
C19H27ClN2
Structure:
Chemical Name:
3-cyclopropyl-1H-1,2,4-triazole(SALTDATA: FREE)
CAS:
1211390-33-8
MF:
C5H7N3
Structure:
Chemical Name:
1-Cyclopropyl-6-fluoro-1,4-dihydro-8-methoxy-7-[(4aR,7aR)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-3-quinolinecarboxylic acid
CAS:
268545-13-7
MF:
C21H24FN3O4
Structure:
Chemical Name:
5-Ethyl-3-(pyrrolidin-3-ylmethoxymethyl)-[1,2,4]oxadiazole
CAS:
914299-45-9
MF:
C10H17N3O2
Structure:
Chemical Name:
Pyrrolidine, 2-(2-hydrazinylethyl)-1-methyl-, hydrochloride (1:1)
CAS:
1269292-40-1
MF:
C7H18ClN3