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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
3,4-Dimethoxy-2-pyridinemethanol
CAS:
72830-08-1
MF:
C8H11NO3
Structure:
Chemical Name:
4-chloro-6-(trifluoromethyl)quinazoline
CAS:
16499-64-2
MF:
C9H4ClF3N2
Structure:
Chemical Name:
1H-Pyrrolo[2,3-b]pyridine-3-carboxaldehyde, 5-bromo-
CAS:
757978-33-9
MF:
C8H5BrN2O
Structure:
Chemical Name:
5-Bromobenzo[c][1,2,5]oxadiazole
CAS:
51376-06-8
MF:
C6H3BrN2O
Structure:
Chemical Name:
Carbonylhydrido[6-(di-t-butylphosphinomethylene)-2-(N,N-diethylaminomethyl)-1,6-dihydropyridine]ruthenium(II), min. 98%
CAS:
863971-63-5
MF:
C19H35N2PRu.CO
Structure:
Chemical Name:
5-IODO-1H-PYRAZOLE
CAS:
1007351-17-8
MF:
C3H3IN2
Structure:
Chemical Name:
ETHYL 2-PHENYL-IMIDAZOLE-4-CARBOXYLATE
CAS:
32683-00-4
MF:
C12H12N2O2
Structure:
Chemical Name:
6-CHLOROBENZIMIDAZOLE-4-CARBOXYLIC ACID
CAS:
180569-27-1
MF:
C8H5ClN2O2
Structure:
Chemical Name:
5-Trifluoromethoxy-1H-indole
CAS:
262593-63-5
MF:
C9H6F3NO
Structure:
Chemical Name:
5-CHLORO-7-METHOXYTHIENO[3,2-B]PYRIDINE
CAS:
90690-91-8
MF:
C8H6ClNOS
Structure:
Chemical Name:
1-METHYL-1,2,3,6-TETRAHYDROPYRIDINE-4-BORONIC ACID PINACOL ESTER
CAS:
454482-11-2
MF:
C12H22BNO2
Structure:
Chemical Name:
1-(3-BROMOPROPYL)PYRROLIDINE-2,5-DIONE
CAS:
88661-56-7
MF:
C7H10BrNO2
Structure:
Chemical Name:
Ethyl 5-(trifluoromethyl)imidazo[1,2-a]pyridine-2-carboxylate
CAS:
1260885-46-8
MF:
C11H9F3N2O2
Structure:
Chemical Name:
4-isocyanato-1-methyl-1H-pyrazole
CAS:
1174064-57-3
MF:
C5H5N3O
Structure:
Chemical Name:
2-Methoxy-4-(tributylstannyl)pyridine
CAS:
1204580-72-2
MF:
C18H33NOSn
Structure:
Chemical Name:
6-Chloropyrimido[5,4-d]pyrimidin-4(3H)-one
CAS:
189747-31-7
MF:
C6H3ClN4O
Structure:
Chemical Name:
JWH 412
CAS:
1364933-59-4
MF:
C24H22FNO
Structure:
Chemical Name:
ethyl 5-amino-1-(pyrimidin-2-yl)-1H-pyrazole-4-carboxylate
CAS:
91129-95-2
MF:
C10H11N5O2
Structure:
Chemical Name:
9-Decenoic acid, methyl ester
CAS:
25601-41-6
MF:
C11H20O2
Structure:
Chemical Name:
(S)-3-Methylmorpholine hydrochloride
CAS:
1022094-03-6
MF:
C5H12ClNO
Structure:
Chemical Name:
4-methoxycarbonyl-6,6'-dimethyl-2,2'-bipyridine
CAS:
562086-30-0
MF:
C14H14N2O2
Structure:
Chemical Name:
7-CHLORO-5-METHYL-1H-PYRAZOLO[4,3-B]PYRIDINE
CAS:
94220-38-9
MF:
C7H6ClN3
Structure:
Chemical Name:
7-(chloromethyl)-5H-[1,3,4]thiadiazolo[3,2-a]pyrimidin-5-one(SALTDATA: FREE)
CAS:
87572-02-9
MF:
C6H4ClN3OS
Structure:
Chemical Name:
3-Iodo-2-methoxy-6-(pyrrolidin-1-yl)pyridine
CAS:
1228666-06-5
MF:
C10H13IN2O
Structure:
Chemical Name:
ethyl 5-oxo-5H-thiazolo[3,2-a]pyriMidine-6-carboxylate
CAS:
32278-52-7
MF:
C9H8N2O3S
Structure:
Chemical Name:
1H-Pyrrolo[2,3-b]pyridine, 5-(4-chlorophenyl)-
CAS:
918516-27-5
MF:
C13H9ClN2
Structure:
Chemical Name:
N-(2-Methoxyethyl)-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pyrimidin-2-amine
CAS:
1202805-24-0
MF:
C13H22BN3O3
Structure:
Chemical Name:
1,3-diMethyliMidazoliuM bis((trifluoroMethyl)sulfonyl)iMide
CAS:
174899-81-1
MF:
C7H9F6N3O4S2
Structure:
Chemical Name:
1-propenyl-3-MethyliMidazoliuM nitrate
CAS:
649745-76-6
MF:
C7H11N3O3
Structure:
Chemical Name:
N-Dodecyl-N,N-dimethyl-3-ammonio-1-propanesulfonate
CAS:
14933-08-5
MF:
C17H37NO3S
Structure:
Chemical Name:
1-tert-butyl-1H-pyrazole-4-carbonitrile
CAS:
149139-43-5
MF:
C8H11N3
Structure:
Chemical Name:
tert-Butyl (3S,4R)-4(3-Fluorophenyl)pyrrolidin-3-ylcarbaMate
CAS:
1260596-09-5
MF:
C15H21FN2O2
Structure:
Chemical Name:
N-[3-(1-IMidazolyl)propyl]-2,4-dichlorobenzaMide
CAS:
349092-52-0
MF:
C13H13Cl2N3O
Structure:
Chemical Name:
IMidazo[1,2-a]pyridine, 8-broMo-6-fluoro-
CAS:
1368664-08-7
MF:
C7H4BrFN2
Structure:
Chemical Name:
IMidazo[1,2-a]pyridine-2-carboxylic acid, 7-Methoxy-
CAS:
129912-15-8
MF:
C9H8N2O3
Structure:
Chemical Name:
1H-IMidazole-2-carboxylic acid, 4-[[(1,1-diMethylethoxy)carbonyl]aMino]-1-Methyl-, ethyl ester
CAS:
128293-63-0
MF:
C12H19N3O4
Structure:
Chemical Name:
4-chloro-2-(trifluoroMethyl)-1H-pyrrolo[2,3-b]pyridine
CAS:
1014613-16-1
MF:
C8H4ClF3N2
Structure:
Chemical Name:
(R)-3-((1-Methylpyrrolidin-2-yl)Methyl)-1H-indole
CAS:
143322-55-8
MF:
C14H18N2
Structure:
Chemical Name:
benzyl 2-(5-broMo-1H-indole-3-carbonyl)pyrrolidine-1-carboxylate
CAS:
331842-86-5
MF:
C21H19BrN2O3
Structure:
Chemical Name:
4-chloro-1-(4-Methoxybenzyl)-1H-iMidazo[4,5-c]pyridine
CAS:
881844-11-7
MF:
C14H12ClN3O
Structure:
Chemical Name:
1-(3-Methoxypropyl)-4-oxo-1,4-dihydropyrido[1,2-a]pyrrolo[2,3-d]pyriMidine-2-carboxylic acid
CAS:
1086386-77-7
MF:
C15H15N3O4
Structure:
Chemical Name:
IMidazo[1,5-a]pyrazine, 5,6,7,8-tetrahydro-1,3-diMethyl-
CAS:
1083317-78-5
MF:
C8H13N3
Structure:
Chemical Name:
1H-IMidazole, 4-broMo-1-Methyl-2-(2-Methylphenyl)-
CAS:
1049126-60-4
MF:
C11H11BrN2
Structure:
Chemical Name:
1,2-Pyrrolidinedicarboxylic acid, 4-(benzoylaMino)-, 1-(1,1-diMethylethyl) 2-Methyl ester, (2S,4R)-
CAS:
943134-37-0
MF:
C18H24N2O5
Structure:
Chemical Name:
6-broMo-3-chloroiMidazo[1,2-a]pyriMidine
CAS:
1019025-49-0
MF:
C6H3BrClN3
Structure:
Chemical Name:
(R)-3-Methylpyrrolidine-3-carboxylic acid
CAS:
1410783-77-5
MF:
C6H11NO2
Structure:
Chemical Name:
5-AMINO-4-CYANO-3-CYANOMETHYLPYRAZOLE
CAS:
54711-21-6
MF:
C6H5N5
Structure:
Chemical Name:
(1S,3S)-phenylethylpyrrolidinylMethanol
CAS:
173724-95-3
MF:
C13H19NO
Structure:
Chemical Name:
6-benzyl-2,4-dichloro-8,8-difluoro-5,6,7,8-tetrahydropyrido[4,3-d]pyriMidine HYDROCHLORIDE
CAS:
1864059-82-4
MF:
C14H12Cl3F2N3
Structure:
Chemical Name:
(5S)-5-Methyl-2-Pyrrolidinone
CAS:
1558-60-7
MF:
C5H9NO
Structure:
Chemical Name:
(3S,5S)-5-Methylpyrrolidin-3-ol
CAS:
1108234-24-7
MF:
C5H11NO
Structure:
Chemical Name:
IMidazo[1,2-d][1,4]benzoxazepine, 9-broMo-5,6-dihydro-2-[3-Methyl-1-(1-Methylethyl)-1H-1,2,4-triazol-5-yl]-
CAS:
1282514-63-9
MF:
C17H18BrN5O
Structure:
Chemical Name:
(S)-1-(2-aminoacetyl)-4,4-difluoropyrrolidine-2-carbonitrile 2,2,2-trifluoroacetate
CAS:
1448440-40-1
MF:
C9H10F5N3O3
Structure:
Chemical Name:
2-Pyrrolidinecarboxamide, N-(4-phenyl-1,2,3-thiadiazol-5-yl)-, monohydrochloride, (2S)- (9CI)
CAS:
873581-19-2
MF:
C13H15ClN4OS
Structure:
Chemical Name:
7,8-dihydro-5H-pyrano[4,3-d]pyrimidine-2,4-diol
CAS:
1478126-83-8
MF:
C7H8N2O3
Structure:
Chemical Name:
3-Oxazolidinecarboxylic acid, 4-methyl-2,5-dioxo-, 1,1-dimethylethyl ester, (4R)-
CAS:
161422-40-8
MF:
C9H13NO5
Structure:
Chemical Name:
(1H-Imidazol-2-yl)-hydrazine hydrochloride
CAS:
1187929-07-2
MF:
C3H7ClN4
Structure:
Chemical Name:
P4S10-Pyridine complex
CAS:
16610-51-8
MF:
C10H10N2P2S5
Structure:
Chemical Name:
1,1'-Thiocarbonyldiimidazole
CAS:
6160-65-2
MF:
C7H6N4S
Structure:
Chemical Name:
(2R,3R)-2-PHENYL-PYRROLIDINE-3-CARBOXYLIC ACID
CAS:
1241684-18-3
MF:
C11H13NO2
Structure:
Chemical Name:
(R)-3-Methylpiperazin-2-one
CAS:
922178-61-8
MF:
C5H10N2O
Structure:
Chemical Name:
3-CYCLOHEXYL-PYRROLIDINE
CAS:
78813-85-1
MF:
C10H19N
Structure:
Chemical Name:
Vinyl pyridine
MF:
C7H7N
Structure:
Chemical Name:
2-Morpholinoethanol
CAS:
622-40-2
MF:
C6H13NO2
Structure:
Chemical Name:
8-Ethyl-2-methanethio-8H-pyrido[2,3-d]pyrimidin-7-one
CAS:
211244-82-5
MF:
C10H11N3OS
Structure:
Chemical Name:
methyl 5-methoxy-3H-benzo[d]imidazole-4-carboxylate
CAS:
1193789-02-4
MF:
C10H10N2O3
Structure:
Chemical Name:
3-Bromo-2-chloro-4-(trifluoromethyl)pyridine
CAS:
1211588-39-4
MF:
C6H2BrClF3N
Structure:
Chemical Name:
3-Fluoro-2-Bromo-4-(trifluoromethyl)pyridine
CAS:
1227577-05-0
MF:
C6H2BrF4N
Structure:
Chemical Name:
Cetilistat Impurity 1
CAS:
282526-87-8
MF:
C21H31NO3
Structure:
Chemical Name:
Cytidine, 4'-C-(chloromethyl)-2'-deoxy-3'-O-[(1,1-dimethylethyl)dimethylsilyl]-5'-O-[(1,1-dimethylethyl)diphenylsilyl]-2'-fluoro-
CAS:
1445379-90-7
MF:
C32H45ClFN3O4Si2
Structure:
Chemical Name:
Benzamide, N-[2-[(3S)-3-[[cis-4-hydroxy-4-[5-(2-pyrimidinyl)-2-pyridinyl]cyclohexyl]amino]-1-pyrrolidinyl]-2-oxoethyl]-3-(trifluoromethyl)-
CAS:
1372407-07-2
MF:
C29H31F3N6O3
Structure:
Chemical Name:
ETHYL 6-FLUORO-IMIDAZO[1,2-A]PYRIDINE-2-CARBOXYLATE
CAS:
367500-93-4
MF:
C10H9FN2O2
Structure:
Chemical Name:
5-BROMO-1H-BENZOTRIAZOLE
CAS:
32046-62-1
MF:
C6H4BrN3
Structure:
Chemical Name:
5-BROMO-7-INDAZOLECARBOXYLIC ACID METHYL ESTER
CAS:
898747-24-5
MF:
C9H7BrN2O2
Structure:
Chemical Name:
8-Methyl-[1,2,4]triazolo[4,3-a]pyridine
CAS:
4997-81-3
MF:
C7H7N3
Structure:
Chemical Name:
MD-PHP
CAS:
776994-64-0
MF:
C17H23NO3
Structure:
Chemical Name:
4,4'-(1,4-phenylene)bis(4H-1,2,4-triazole)
CAS:
681004-60-4
MF:
C10H8N6
Structure:
Chemical Name:
4-chloro-3-iodo-1-((2-(trimethylsilyl)ethoxy)methyl)-1H-pyrrolo[2,3-b]pyridine
CAS:
1203566-02-2
MF:
C13H18ClIN2OSi
Structure:
Chemical Name:
Chloro[1,3-bis(t-butyl)-2H-imidazol-2-ylidene]gold(I)
CAS:
839722-07-5
MF:
C11H20AuClN2
Structure:
Chemical Name:
6-oxo-1,6-dihydropyridine-3-sulfonyl chloride
CAS:
1357566-60-9
MF:
C5H4ClNO3S
Structure:
Chemical Name:
2-((5-bromopyrimidin-2-yl)oxy)ethan-1-ol
CAS:
1246922-88-2
MF:
C6H7BrN2O2
Structure:
Chemical Name:
5,7-DIBROMO-1H-PYRAZOLO[4,3-B]PYRIDINE
CAS:
1956379-02-4
MF:
C6H3Br2N3
Structure:
Chemical Name:
2-(Cyanomethyl)benzimidazole
CAS:
4414-88-4
MF:
C9H7N3
Structure:
Chemical Name:
5-fluoro-1H-pyrimidine-2,4-dione
CAS:
1189423-58-2
MF:
C4H3FN2O2
Structure:
Chemical Name:
Oxymetazoline
CAS:
1491-59-4
MF:
C16H24N2O
Structure:
Chemical Name:
3-BROMO-6-METHYLIMIDAZO[1,2-A]PYRIDINE
CAS:
866135-71-9
MF:
C8H7BrN2
Structure:
Chemical Name:
1-(2-aminoethyl)-5-[(4-chlorophenyl)methyl]-1H,4H,5H-pyrazolo[3,4-d]pyrimidin-4-one
CAS:
1105196-80-2
MF:
C14H14ClN5O
Structure:
Chemical Name:
3-(5-PIPERIDIN-4-YL-1,2,4-OXADIAZOL-3-YL)PYRIDINE
CAS:
114474-26-9
MF:
C9H7N3O2
Structure:
Chemical Name:
2,2,6-Trimethyl-4H-1,3-dioxin-4-one
CAS:
5394-63-8
MF:
C7H10O3
Structure:
Chemical Name:
4-Bromo-1-chloro-2-nitrobenzene
CAS:
16588-24-2
MF:
C6H3BrClNO2
Structure:
Chemical Name:
1,5-DIMETHYL-3-(TRIFLUOROMETHYL)-1H-PYRAZOLE
CAS:
79080-31-2
MF:
C6H7F3N2
Structure:
Chemical Name:
4-(BROMOMETHYL)ISOXAZOLE
CAS:
6455-40-9
MF:
C4H4BrNO
Structure:
Chemical Name:
4-chloro-7-(2-methoxyethoxy)quinazoline
CAS:
199327-54-3
MF:
C11H11ClN2O2
Structure:
Chemical Name:
Ethyl 4-iodo-1H-imidazole-2-carboxylate
CAS:
1824103-80-1
MF:
C6H7IN2O2
Structure:
Chemical Name:
4-(2-THIAZOLYL)PHENOL
CAS:
81015-49-8
MF:
C9H7NOS
Structure:
Chemical Name:
7-chloro-3H,4H-thieno[3,4-d]pyrimidin-4-one
CAS:
53826-83-8
MF:
C6H3ClN2OS
Structure:
Chemical Name:
5-AMINO-1,3-DIMETHYL-1H-PYRAZOLE-4-CARBONITRILE
CAS:
54820-92-7
MF:
C6H8N4
Structure:
Chemical Name:
(R)-3-Fluoropyrrolidine-1-sulfonyl chloride
CAS:
1411774-27-0
MF:
C4H7ClFNO2S
Structure:
Chemical Name:
(S)-Ethyl 6-(5-bromofuran-2-yl)-7,9-dimethyl-8,10-dioxo-11-phenyl-7,8,9,10-tetrahydro-6H-benzo[b]pyrimido[4',5':3,4]pyrrolo[1,2-d][1,4]oxazine-2-carboxylate
CAS:
1415390-49-6
MF:
C28H22BrN3O6
Structure:
Chemical Name:
(3S,4R)-3-amino-4-hydroxypyrrolidin-2-one hydrochloride
CAS:
2446872-13-3
MF:
C4H9ClN2O2