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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
6,7-DIMETHOXY-1,2,3,4-TETRAHYDROISOQUINOLINE
CAS:
1745-07-9
MF:
C11H15NO2
Structure:
Chemical Name:
4-IMIDAZO[1,2-A]PYRIDIN-2-YLPHENYL METHYL ETHER
CAS:
31562-99-9
MF:
C14H12N2O
Structure:
Chemical Name:
6-METHYL-2-PHENYL-IMIDAZO[1,2-A]PYRIDINE-3-CARBALDEHYDE
CAS:
727975-78-2
MF:
C15H12N2O
Structure:
Chemical Name:
4-PYRAZOL-1-YL-BENZONITRILE
CAS:
25699-83-6
MF:
C10H7N3
Structure:
Chemical Name:
2,6-Bis((bis(2-methylphenyl)phosphino))methyl)pyridine
CAS:
501663-96-3
MF:
C35H35NP2
Structure:
Chemical Name:
N,N'-(butane-1,4-diyl)bis(1-(benzyloxy)-N-(3-(1-(benzyloxy)-6-oxo-1,6-dihydropyridine-2-carboxamido)propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide)
MF:
C62H62N8O12
Structure:
Chemical Name:
3,3'-dimethyl-1H,1H'-4,4'-bipyrazole
CAS:
1816270-47-9
MF:
C8H10N4
Structure:
Chemical Name:
4-Pyridinecarboxamide, 2-chloro-3-methoxy-
CAS:
1935682-11-3
MF:
C7H7ClN2O2
Structure:
Chemical Name:
6-FLUORO-IMIDAZO[1,2-A]PYRIDINE-2-CARBOXYLIC ACID
CAS:
367900-94-5
MF:
C8H5FN2O2
Structure:
Chemical Name:
Butonitazene
CAS:
95810-54-1
MF:
C24H32N4O3
Structure:
Chemical Name:
(S)-ALPHA,ALPHA-BIS(4-FLUOROPHENYL)-2-PYRROLIDINEMETHANOL
CAS:
131180-45-5
MF:
C17H17F2NO
Structure:
Chemical Name:
1,2,4-Triazine-3,5(2H,4H)-dione, 6-(3-amino-1-pyrrolidinyl)-
CAS:
1249530-93-5
MF:
C7H11N5O2
Structure:
Chemical Name:
Pyrimidine, 4-hydrazinyl-2-(2-pyridinyl)-6-(trifluoromethyl)-
CAS:
1306604-16-9
MF:
C10H8F3N5
Structure:
Chemical Name:
2-Pyrrolidinecarboximidamide
CAS:
1310457-96-5
MF:
C5H11N3
Structure:
Chemical Name:
3-(4-METHOXYPHENYL)PYRROLIDINE
CAS:
91246-26-3
MF:
C11H15NO
Structure:
Chemical Name:
4-(4-BROMO-PHENYL)-1H-IMIDAZOLE
CAS:
13569-96-5
MF:
C9H7BrN2
Structure:
Chemical Name:
4-BROMO-3-PHENYL-1H-PYRAZOLE
CAS:
13808-65-6
MF:
C9H7BrN2
Structure:
Chemical Name:
1-[(DIMETHYLAMINO)METHYL]IMIDAZOLE
CAS:
23230-39-9
MF:
C6H11N3
Structure:
Chemical Name:
3-(3-Bromophenyl)-1-methyl-1H-pyrazole
CAS:
425379-68-6
MF:
C10H9BrN2
Structure:
Chemical Name:
1,1'-bis(4-cyanophenyl)-[4,4'-bipyridine]-1,1'-diium chloride
CAS:
31515-20-5
MF:
C24H16ClN4+
Structure:
Chemical Name:
6-AMino-1-isobutyl-3-Methyl-5-nitroso-2,4-pyriMidinedione
CAS:
54052-67-4
MF:
C9H14N4O3
Structure:
Chemical Name:
tetrahydro-4-hydroxy-6-isopropyl-5,5-dimethyl-1H-pyrimidin-2-one
CAS:
14068-64-5
MF:
C9H18N2O2
Structure:
Chemical Name:
methyl (S)-2,5-dioxooxazolidine-4-propionate
CAS:
1663-47-4
MF:
C7H9NO5
Structure:
Chemical Name:
4-[2-(methylthio)ethyl]oxazolidine-2,5-dione
CAS:
5840-77-7
MF:
C6H9NO3S
Structure:
Chemical Name:
3-pyrrolidin-1-ylandrosta-3,5-dien-17-one
CAS:
905-30-6
MF:
C23H33NO
Structure:
Chemical Name:
3-(trifluoromethyl)-5H,6H,7H,8H-imidazo[1,5-a]pyrazine-1-carboxylic acid hydrochloride
CAS:
2172053-56-2
MF:
C8H9ClF3N3O2
Structure:
Chemical Name:
tetrahydro-1,3-bis(hydroxymethyl)-1H-pyrimidin-2-one
CAS:
3270-74-4
MF:
C6H12N2O3
Structure:
Chemical Name:
4-ethyl-2-methyl-4,5-dihydrothiazole
CAS:
4293-61-2
MF:
C6H11NS
Structure:
Chemical Name:
[2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl] hydrogen succinate
CAS:
13182-87-1
MF:
C10H13N3O6
Structure:
Chemical Name:
(S)-2-(Methoxydiphenylmethyl)pyrrolidine
CAS:
118971-03-2
MF:
C18H21NO
Chemical Name:
1-(azetidin-3-yl)-4-iodo-1H-pyrazole hydrochloride
Structure:
Chemical Name:
(S)-4-iodo-1-(pyrrolidin-3-yl)-1H-pyrazole hydrochloride
CAS:
2828444-29-5
MF:
C7H11ClIN3
Structure:
Chemical Name:
2-Pyridinecarboxamide, 5-[[[(1,1-dimethylethyl)dimethylsilyl]oxy]amino]-1,2,5,6-tetrahydro-4-methyl-, (2S,5R)-
CAS:
2209874-05-3
MF:
C13H27N3O2Si
Structure:
Chemical Name:
1-methyl-2-Pyrrolidonium tetrafluoroborate chloride
CAS:
942068-29-3
MF:
C9H13N5
Structure:
Chemical Name:
Imidazo[1,2-a]pyrazine, 5,6,7,8-tetrahydro-2-(trifluoromethyl)- (9CI)
CAS:
126069-70-3
MF:
C7H8F3N3
Structure:
Chemical Name:
Proline, 1-(2-cyanoethyl)- (9CI)
CAS:
36901-89-0
MF:
C8H12N2O2
Structure:
Chemical Name:
Carbamic acid, [(3R,4S)-4-fluoro-3-pyrrolidinyl]-, 1,1-dimethylethyl ester, rel-
CAS:
169750-42-9
MF:
C9H17FN2O2
Structure:
Chemical Name:
1-Octanoylbenzotriazole
CAS:
58068-80-7
MF:
C14H19N3O
Structure:
Chemical Name:
2-CHLORO-3-IODO-5-PICOLINE
CAS:
59782-91-1
MF:
C6H5ClIN
Structure:
Chemical Name:
2,4,6(1H,3H,5H)-Pyrimidinetrione, 5-methyl- (9CI)
CAS:
2417-22-3
MF:
C5H6N2O3
Structure:
Chemical Name:
4-Pyrimidinecarbonitrile, 2-(dimethylamino)- (9CI)
CAS:
79605-00-8
MF:
C7H8N4
Structure:
Chemical Name:
1H-BENZIMIDAZOL-7-AMINE
CAS:
4331-29-7
MF:
C7H7N3
Structure:
Chemical Name:
1-(tert-butyl) 2-methyl (2S,4R)-4-((4,4''-diamino-5'-(4-aminophenyl)-[1,1':3',1''-terphenyl]-4'-yl)oxy)pyrrolidine-1,2-dicarboxylate
CAS:
2116475-69-3
MF:
C35H38N4O5
Chemical Name:
2-chloro-3-methoxy-4-(1-((2-(trimethylsilyl)ethoxy)methyl)-1H-1,2,4-triazol-3-yl)pyridine
Chemical Name:
Fenoxazoline
Structure:
Chemical Name:
Midodrine hydrochloride
CAS:
3092-17-9
MF:
C12H19ClN2O4
Structure:
Chemical Name:
P-(2-BENZOXAZOLYL)BENZYL CHLORIDE
CAS:
57864-19-4
MF:
C14H10ClNO
Structure:
Chemical Name:
6-methyl-1H-indole-2,3-dione
CAS:
1128-44-5
MF:
C9H7NO2
Structure:
Chemical Name:
5-Chloro-2-methoxy-4-methylpyridine
CAS:
851607-29-9
MF:
C7H8ClNO
Structure:
Chemical Name:
3-IODO-4-METHOXY-PYRIDINE
CAS:
89640-55-1
MF:
C6H6INO
Structure:
Chemical Name:
1H-Benzimidazole,5-chloro-2-propyl-(9CI)
CAS:
4887-91-6
MF:
C10H11ClN2
Structure:
Chemical Name:
7H-Pyrrolo[1,2-c]imidazol-7-one,5,6-dihydro-(9CI)
CAS:
426219-43-4
MF:
C6H6N2O
Structure:
Chemical Name:
1H-Benzimidazol-2-amine,5-chloro-6-fluoro-(9CI)
CAS:
142356-64-7
MF:
C7H5ClFN3
Structure:
Chemical Name:
1H-Imidazole-5-carboxylicacid,1-(1-methylethyl)-(9CI)
CAS:
105293-81-0
MF:
C7H10N2O2
Structure:
Chemical Name:
3-(4-Pyridine)acrylic acid
CAS:
84228-93-3
MF:
C8H7NO2
Structure:
Chemical Name:
1-tert-Butyl-4-iodo-1H-pyrazole
CAS:
1354705-41-1
MF:
C7H11IN2
Structure:
Chemical Name:
1-(azetidin-3-yl)-4-iodo-1H-pyrazole
CAS:
1343072-59-2
MF:
C6H8IN3
Structure:
Chemical Name:
6-CHLORO-2-PHENYLIMIDAZO[1,2-A]PYRIDINE-3-CARBOXYLIC ACID
CAS:
220465-51-0
MF:
C14H9ClN2O2
Structure:
Chemical Name:
1,3-DIMETHYL-4-NITRO-1H-PYRAZOLE
CAS:
3920-38-5
MF:
C5H7N3O2
Structure:
Chemical Name:
7-BROMO-1H-INDOLE-3-CARBALDEHYDE
CAS:
115666-21-2
MF:
C9H6BrNO
Structure:
Chemical Name:
6-AZACYTOSINE
CAS:
931-85-1
MF:
C3H4N4O
Structure:
Chemical Name:
2-OXO-PYRROLIDINE-3-CARBOXYLIC ACID ETHYL ESTER
CAS:
36821-26-8
MF:
C7H11NO3
Structure:
Chemical Name:
3,5-DIMETHYL-4-NITROISOXAZOLE
CAS:
1123-49-5
MF:
C5H6N2O3
Structure:
Chemical Name:
Benzyl (2R,4S)-4-amino-2-methylpyrrolidine-1-carboxylate
CAS:
2165506-16-9
MF:
C13H18N2O2
Structure:
Chemical Name:
6'-Bromo-8'-chloro-1',5'-dioxo-1',5'-dihydro-2'H-spiro[cyclohexane-1,3'-imidazo[1,5-a]pyridine]-4-carbonitrile
CAS:
1849593-46-9
MF:
C13H11BrClN3O2
Structure:
Chemical Name:
5-[1-(hydroxyimino)ethyl]-4-methylpyrimidin-2-amine
CAS:
1050886-14-0
MF:
C7H10N4O
Structure:
Chemical Name:
2-BROMO-4-METHYL-1H-IMIDAZOLE
CAS:
23328-88-3
MF:
C4H5BrN2
Structure:
Chemical Name:
1-(3,4,5-Trihydroxypentanoyl)-β-carboline
CAS:
180995-40-8
MF:
C16H16N2O4
Structure:
Chemical Name:
(6-Methyl-1H-benzimidazol-2-yl)methanol
CAS:
20034-02-0
MF:
C9H10N2O
Structure:
Chemical Name:
4-(2-bromoethyl)pyridine hydrobromide
CAS:
120277-01-2
MF:
C7H9Br2N
Structure:
Chemical Name:
1-{[(tert-butoxy)carbonyl]amino}-5-oxopyrrolidine-3-carboxylic acid
CAS:
1354952-07-0
MF:
C10H16N2O5
Structure:
Chemical Name:
Terevalefim
CAS:
1070881-42-3
MF:
C9H8N2S
Structure:
Chemical Name:
1,3-DIMETHYL-1H-PYRAZOLE-5-CARBONITRILE
CAS:
306936-77-6
MF:
C6H7N3
Structure:
Chemical Name:
2-{5H,6H,7H,8H,9H-[1,2,4]triazolo[4,3-a]azepin-3-yl}pyrrolidine
CAS:
923690-18-0
MF:
C11H18N4
Structure:
Chemical Name:
4-chloro-6-(2,2,2-trifluoroethyl)thieno[3,2-d]pyrimidine
CAS:
2102553-51-3
MF:
C8H4ClF3N2S
Structure:
Chemical Name:
Fluclotizolam
CAS:
54123-15-8
MF:
C15H10ClFN4S
Structure:
Chemical Name:
4-(4-(cyclopentyloxy)quinolin-2-yl)benzene-1,2-diol
CAS:
1353224-53-9
MF:
C20H19NO3
Structure:
Chemical Name:
4-Pyrimidinamine, 5,6-dichloro-N-methyl-
CAS:
1428252-93-0
MF:
C5H5Cl2N3
Structure:
Chemical Name:
2-(6-Methoxy-naphthalen-1-yl)-4,4,5,5-tetramethyl-[1,3,2]dioxaborolane
CAS:
588717-94-6
MF:
C17H21BO3
Structure:
Chemical Name:
10-chloro-Benzo[kl]xanthene
CAS:
1803291-27-1
MF:
C16H9ClO
Structure:
Chemical Name:
(2,5-dioxopyrrolidin-1-yl) (2R)-2-[(2-methylpropan-2-yl)oxycarbonylamino]-5-(phenylmethoxycarbonylamino)pentanoate
CAS:
57225-26-0
MF:
C22H29N3O8
Structure:
Chemical Name:
Ethyl 1-Methyl-2,4-dioxo-1H,2H,3H,4H-pyrido[2,3-d]pyrimidine-7-carboxylate
CAS:
1000932-39-7
MF:
C11H11N3O4
Structure:
Chemical Name:
5-(Benzyloxy)-1,2-dimethyl-6-oxo-1,6-dihydropyrimidine-4-carboxylic acid
CAS:
389130-68-1
MF:
C14H14N2O4
Structure:
Chemical Name:
4-(propan-2-yl)pyrimidin-5-amine dihydrochloride
CAS:
2241139-74-0
MF:
C7H12ClN3
Structure:
Chemical Name:
4-Fluoro-5-hydroxy-2-methylindole
CAS:
288385-88-6
MF:
C9H8FNO
Structure:
Chemical Name:
1,3-Dioxolane
CAS:
646-06-0
MF:
C3H6O2
Structure:
Chemical Name:
5-ISOXAZOLEMETHANOL
CAS:
98019-60-4
MF:
C4H5NO2
Structure:
Chemical Name:
Boron trifluoride tetrahydrofuran complex
CAS:
462-34-0
MF:
C4H8BF3O
Structure:
Chemical Name:
Oxazole-4-carbonitrile
CAS:
55242-84-7
MF:
C4H2N2O
Structure:
Chemical Name:
PYRROLO[1,2-F][1,2,4]TRIAZIN-4-AMINE
CAS:
159326-68-8
MF:
C6H6N4
Structure:
Chemical Name:
OXOTREMORINE SESQUIFUMARATE
CAS:
17360-35-9
MF:
C36H48N4O14
Structure:
Chemical Name:
2,4,4-TRIMETHYL-2-OXAZOLINE
CAS:
1772-43-6
MF:
C6H11NO
Structure:
Chemical Name:
4-Thiazolecarboxylic acid
CAS:
3973-08-8
MF:
C4H3NO2S
Structure:
Chemical Name:
2-ISOPROPYL-4(5)-NITROIMIDAZOLE
CAS:
13373-32-5
MF:
C6H9N3O2
Chemical Name:
(2R,4S)-1-((S)-2-amino-3,3-dimethylbutanoyl)-4-hydroxy-N-((S)-1-(4-(4-methylthiazol-5-yl)phenyl)ethyl)pyrrolidine-2-carboxamide hydrochloride
Structure:
Chemical Name:
2H-IMIDAZO[4,5-B]PYRAZIN-2-ONE, 1,3-DIHYDRO-
CAS:
16328-63-5
MF:
C5H4N4O
Structure:
Chemical Name:
6-METHYL-2-(PIPERIDIN-4-YL)-1H-BENZO[D]IMIDAZOLE
CAS:
295790-48-6
MF:
C13H17N3
Structure:
Chemical Name:
1,6-Diazabicyclo[3.2.1]octane-2-carboxylic acid, 7-oxo-6-(sulfooxy)-, 2-[2-[(3S)-3-pyrrolidinylcarbonyl]hydrazide], (1R,2S,5R)-
CAS:
1452460-79-5
MF:
C12H19N5O7S
Structure:
Chemical Name:
1-METHYL-1H-BENZOIMIDAZOL-5-YLAMINE TRIHYDROCHLORIDE
CAS:
10394-38-4
MF:
C8H9N3
Structure:
Chemical Name:
4-CHLORO-2-PHENYLQUINAZOLINE
CAS:
6484-25-9
MF:
C14H9ClN2