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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
1-benzyl-5-bromo-1H-imidazole
CAS:
132430-59-2
MF:
C10H9BrN2
Structure:
Chemical Name:
1-benzyl-5-bromo-1H-imidazole
CAS:
132430-59-2
MF:
C10H9BrN2
Structure:
Chemical Name:
1-benzyl-5-bromo-1H-imidazole
CAS:
132430-59-2
MF:
C10H9BrN2
Structure:
Chemical Name:
1-benzyl-5-bromo-1H-imidazole
CAS:
132430-59-2
MF:
C10H9BrN2
Structure:
Chemical Name:
2,4,5-triMethyl-4,5-dihydro-1H-iMidazole-4,5-diol
CAS:
740025-56-3
MF:
C6H12N2O2
Structure:
Chemical Name:
7-BroMo-3-MethyliMidazo[1,5-a]pyridine
CAS:
1379355-19-7
MF:
C8H7BrN2
Structure:
Chemical Name:
1H-Pyrazolo[3,4-d]pyrimidine-4-carboxylic acid
CAS:
1095822-28-8
MF:
C6H4N4O2
Structure:
Chemical Name:
Pyridine, 4-[2-(1H-iMidazol-2-yl)phenyl]-
CAS:
608515-26-0
MF:
C14H11N3
Structure:
Chemical Name:
1-(2-HydroxyMethyl-pyrrolidin-1-yl)-ethanone
CAS:
27822-68-0
MF:
C7H13NO2
Structure:
Chemical Name:
1-Acetyl-pyrrolidin-3-one
CAS:
34086-58-3
MF:
C6H9NO2
Structure:
Chemical Name:
1-tert-butyl-5-phenyl-1H-pyrazole
CAS:
1204355-48-5
MF:
C13H16N2
Structure:
Chemical Name:
4-broMo-1-Methyl-1H-pyrazolo[3,4-c]pyridine
CAS:
1032943-41-1
MF:
C7H6BrN3
Structure:
Chemical Name:
4H-IMidazo[4,5-c]pyridin-4-one, 7-broMo-1,5-dihydro-
CAS:
163452-70-8
MF:
C6H4BrN3O
Structure:
Chemical Name:
IMidazo[1,2-a]pyridin-6-aMine, 2-Methyl-
CAS:
860258-05-5
MF:
C8H9N3
Structure:
Chemical Name:
7-chloro-5-(Methylthio)iMidazo[1,2-c]pyriMidine
CAS:
872059-27-3
MF:
C7H6ClN3S
Structure:
Chemical Name:
2-(chloroMethyl)-6-(trifluoroMethyl)pyridine
CAS:
849094-03-7
MF:
C7H5ClF3N
Structure:
Chemical Name:
tert-Butyl ((1H-benzo[d]imidazol-2-yl)methyl)carbamate
CAS:
189560-83-6
MF:
C13H17N3O2
Structure:
Chemical Name:
6-fluoro-3-(4-(3-Methoxy-4-(4-Methyl-1H-iMidazol-1-yl)phenyl)-1H-1,2,3-triazol-1-yl)-4,5-dihydro-1H-benzo[b]azepin-2(3H)-one
CAS:
1093978-67-6
MF:
C23H21FN6O2
Structure:
Chemical Name:
1,2-Pyrrolidinedicarboxylic acid, 5-hydroxy-, 1-(1,1-diMethylethyl) 2-Methyl ester, (2S)-
CAS:
188200-05-7
MF:
C11H19NO5
Structure:
Chemical Name:
4-PyriMidinecarboxylic acid, 6-aMino-5-chloro-, ethyl ester
CAS:
1097250-86-6
MF:
C7H8ClN3O2
Structure:
Chemical Name:
2-Chloro-1H-imidazole
CAS:
16265-04-6
MF:
C3H3ClN2
Structure:
Chemical Name:
1-(Piperidin-4-yl)pyrrolidin-2-one HCl
CAS:
548769-02-4
MF:
C9H17ClN2O
Structure:
Chemical Name:
3-BroMo-4-nitropyrazole
CAS:
784193-37-9
MF:
C3H2BrN3O2
Structure:
Chemical Name:
5-Methoxy-pyridine-2-sulfonyl chloride
CAS:
1060801-83-3
MF:
C6H6ClNO3S
Structure:
Chemical Name:
Pyrido[4,3-d]pyriMidine-2,4(1H,3H)-dione
CAS:
16952-65-1
MF:
C7H5N3O2
Structure:
Chemical Name:
Pyrido[4,3-d]pyriMidine-2,4(1H,3H)-dione
CAS:
16952-65-1
MF:
C7H5N3O2
Structure:
Chemical Name:
ethyl 5-aMino-2-chloropyriMidine-4-carboxylate
CAS:
59950-50-4
MF:
C7H8ClN3O2
Structure:
Chemical Name:
1-(CyclopropylMethyl)pyrazole
CAS:
1344382-51-9
MF:
C7H10N2
Structure:
Chemical Name:
Bromazolam
CAS:
71368-80-4
MF:
C17H13BrN4
Structure:
Chemical Name:
4,5-dibroMo-1-Methyl-1H-1,2,3-triazole
CAS:
25537-64-8
MF:
C3H3Br2N3
Structure:
Chemical Name:
5-BroMo-4-chloronicotinonitrile
CAS:
1160923-98-7
MF:
C6H2BrClN2
Structure:
Chemical Name:
Spiro[pyrrolidine-2,7'(6'H)-[2H]pyrrolo[2,1-b][1,3]thiazine]-1,4'-dicarboxylic acid, tetrahydro-6'-oxo-, 1-(1,1-diMethylethyl) 4'-Methyl ester, (2R,4'R,8'aR)-
CAS:
221040-37-5
MF:
C17H26N2O5S
Structure:
Chemical Name:
Senexin A
CAS:
1366002-50-7
MF:
C17H14N4
Structure:
Chemical Name:
di-tert-butyl (4-chloropyriMidin-2-yl)carbaMate
CAS:
1464788-84-8
MF:
C14H20ClN3O4
Structure:
Chemical Name:
di-tert-butyl (4-chloropyriMidin-2-yl)carbaMate
CAS:
1464788-84-8
MF:
C14H20ClN3O4
Structure:
Chemical Name:
di-tert-butyl (4-chloropyriMidin-2-yl)carbaMate
CAS:
1464788-84-8
MF:
C14H20ClN3O4
Structure:
Chemical Name:
di-tert-butyl (4-chloropyriMidin-2-yl)carbaMate
CAS:
1464788-84-8
MF:
C14H20ClN3O4
Structure:
Chemical Name:
di-tert-butyl (4-chloropyriMidin-2-yl)carbaMate
CAS:
1464788-84-8
MF:
C14H20ClN3O4
Structure:
Chemical Name:
7-Bromo-2-methylimidazo[1,2-a]-pyridine-3-carboxylic acid
CAS:
1159831-07-8
MF:
C9H7BrN2O2
Structure:
Chemical Name:
1-Hydroxy-1,3-dihydro-2,1-benzoxaborole-6-carboxylic acid
CAS:
1221343-14-1
MF:
C8H7BO4
Structure:
Chemical Name:
2,4-dichloro-5,7-dihydrothieno[3,4-d]pyriMidine
CAS:
74901-71-6
MF:
C6H4Cl2N2S
Structure:
Chemical Name:
6-BroMo-iMidazo[1,2-a]pyriMidine-2-carboxylic acid
CAS:
907945-69-1
MF:
C7H4BrN3O2
Structure:
Chemical Name:
FMoc-α-Me-D-Pro-OH
CAS:
1286768-33-9
MF:
C21H21NO4
Structure:
Chemical Name:
2-CHLORO-IMIDAZO[1,2-A]PYRIDINE-3-CARBOXYLIC ACID
CAS:
522604-25-7
MF:
C8H5ClN2O2
Structure:
Chemical Name:
BOC-3-FLUORO-4-OXOPYRROLIDINE
CAS:
845894-03-3
MF:
C9H14FNO3
Structure:
Chemical Name:
3-ETHYL-4-IODO-1H-PYRAZOLE
CAS:
442876-19-9
MF:
C5H7IN2
Structure:
Chemical Name:
1-[2-(azetidin-1-yl)ethyl]-4-(tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole
CAS:
1422126-12-2
MF:
C14H24BN3O2
Structure:
Chemical Name:
7-Chloro-6-iodoimidazo[1,2-a]pyrimidin-5(1H)-one
CAS:
1799434-64-2
MF:
C6H3ClIN3O
Structure:
Chemical Name:
1-isopropylpyrimidine-2,4,6(1H,3H,5H)-trione
CAS:
69998-14-7
MF:
C7H10N2O3
Structure:
Chemical Name:
6-(3-methoxyphenyl)imidazo[2,1-b]thiazole
CAS:
92754-06-8
MF:
C12H10N2OS
Structure:
Chemical Name:
7-benzenesulfonyl-4-chloro-5-iodo-7H-pyrrolo[2,3-d]pyrimidine
CAS:
208459-84-1
MF:
C12H7ClIN3O2S
Structure:
Chemical Name:
7-benzenesulfonyl-4-chloro-5-iodo-7H-pyrrolo[2,3-d]pyrimidine
CAS:
208459-84-1
MF:
C12H7ClIN3O2S
Structure:
Chemical Name:
2-(4-(2H-tetrazol-5-yl)phenoxy)-5-chloro-3-fluoropyridine
CAS:
1799681-96-1
MF:
C12H7ClFN5O
Structure:
Chemical Name:
1-Methylpyrrolidin-3-amine hydrochloride
CAS:
1538307-77-5
MF:
C5H13ClN2
Structure:
Chemical Name:
7-(4-Methoxybenzyl)-5-Methyl-3-(Phenylamino)-2H-Pyrazolo[3,4-D]Pyrimidine-4,6(5H,7H)-Dione
CAS:
1160521-51-6
MF:
C20H19N5O3
Structure:
Chemical Name:
3,3'-Methylenebis(1-tert-butyl-3-imidazolium Bromide)
CAS:
247902-48-3
MF:
C15H26Br2N4
Structure:
Chemical Name:
6-Methylimidazo[1,2-a]pyrimidine-3-carboxylic acid
CAS:
1020035-04-4
MF:
C8H7N3O2
Structure:
Chemical Name:
1-(2-Methoxyethyl)-1-methylpyrrolidinium Bis(fluorosulfonyl)imide
CAS:
1235234-47-5
MF:
C8H18F2N2O5S2
Structure:
Chemical Name:
1-Methylimidazole
CAS:
616-47-7
MF:
C4H6N2
Structure:
Chemical Name:
2-Cyclopropyl-4-iodo-1-isopropyl-1H-imidazole
CAS:
824431-88-1
MF:
C9H13IN2
Structure:
Chemical Name:
tert-butyl 3-[4-(tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazol-1-yl]pyrrolidine-1-carboxylate
CAS:
1359974-18-7
MF:
C18H30BN3O4
Structure:
Chemical Name:
4-CHLORO-6,7-DIETHOXY-QUINAZOLINE
CAS:
162363-46-4
MF:
C12H13ClN2O2
Structure:
Chemical Name:
trans-4-fluoro-3-hydroxypyrrolidine hydrochloride
CAS:
2006333-41-9
MF:
C4H9ClFNO
Structure:
Chemical Name:
9,9'-Bis([1,1'-biphenyl]-3-yl)-3,3'-bi-9H-carbazole
CAS:
1352040-89-1
MF:
C48H32N2
Structure:
Chemical Name:
7-Bromo-2,4-dichloropyrido[3,2-d]pyrimidine
CAS:
1215074-41-1
MF:
C7H2BrCl2N3
Structure:
Chemical Name:
Chloro[1,3-bis(2,4,6-trimethylphenyl)-4,5-dihydroimidazol-2-ylidene]gold(I)
CAS:
852445-82-0
MF:
C21H26AuClN2
Structure:
Chemical Name:
4-Bromo-1,2-dimethyl-1H-benzo[d]imidazole
CAS:
1379361-12-2
MF:
C9H9BrN2
Structure:
Chemical Name:
6-BROMO-2-CHLOROOXAZOLO[5,4-B]PYRIDINE
CAS:
1782797-89-0
MF:
C6H2BrClN2O
Structure:
Chemical Name:
1-(4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl)pyrrolidin-2-one
CAS:
1003309-09-8
MF:
C16H22BNO3
Structure:
Chemical Name:
2-(1H-Pyrazol-1-yl)-5-(trifluoromethyl)pyrimidine
CAS:
1398504-38-5
MF:
C8H5F3N4
Structure:
Chemical Name:
FHMKYTDEGLFVSL-UHFFFAOYSA-N
CAS:
76182-29-1
MF:
C6H7ClN2O2
Structure:
Chemical Name:
(S)-Pyrrolidine-2-carbonitrile hydrochloride
CAS:
65732-69-6
MF:
C5H9ClN2
Structure:
Chemical Name:
8-bromo-2-chloroimidazo[1,2-a]pyridine
CAS:
1260902-12-2
MF:
C7H4BrClN2
Structure:
Chemical Name:
CHEMBRDG-BB 4010221
CAS:
6857-34-7
MF:
C9H8N2S
Structure:
Chemical Name:
N-CYANOACETYLPYRROLIDINE
CAS:
14227-95-3
MF:
C7H10N2O
Structure:
Chemical Name:
1-Methylindole
CAS:
603-76-9
MF:
C9H9N
Structure:
Chemical Name:
4-(MORPHOLINOMETHYL)BENZYLAMINE
CAS:
91271-84-0
MF:
C12H18N2O
Structure:
Chemical Name:
5-Chloro-1-(4-piperidyl)-2-benzimidazolinone
CAS:
53786-28-0
MF:
C12H14ClN3O
Structure:
Chemical Name:
(6-Methyl-thieno[2,3-d]pyrimidin-4-yl)-hydrazine
CAS:
439692-69-0
MF:
C7H8N4S
Structure:
Chemical Name:
3-Indoleacetonitrile
CAS:
771-51-7
MF:
C10H8N2
Structure:
Chemical Name:
4-(FMOC-AMINO)-1-METHYL-1H-IMIDAZOLE-2-CARBOXYLIC ACID
CAS:
252206-28-3
MF:
C20H17N3O4
Structure:
Chemical Name:
2-Methylene-1,3-dioxepane
CAS:
69814-56-8
MF:
C6H10O2
Structure:
Chemical Name:
5,5',5'',5'''-([2,2'-bi(1,3-dithiolylidene)]-4,4',5,5'-tetrayl)tetraisophthalic acid
CAS:
2172997-02-1
MF:
C38H20O16S4
Structure:
Chemical Name:
6-Methyl-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-ol
CAS:
2222660-14-0
MF:
C7H9N3O4
Structure:
Chemical Name:
5-(2,5-dimethyl-1H-pyrrol-1-yl)-1-methyl-1H-pyrazole
CAS:
34605-70-4
MF:
C10H13N3
Structure:
Chemical Name:
7H-pyrrolo[2,3-d]pyrimidine-2-carboxylic acid
CAS:
1314723-98-2
MF:
C7H5N3O2
Structure:
Chemical Name:
10H-spiro[acridine-9,9'-xanthene]
CAS:
1443130-79-7
MF:
C25H17NO
Structure:
Chemical Name:
(S)-1-(2-(trifluoromethyl)pyrimidin-5-yl)ethan-1-amine
CAS:
1948237-00-0
MF:
C7H8F3N3
Structure:
Chemical Name:
Imidazo[1,2-a]pyridine, 3-bromo-2-(4- fluorophenyl)-
CAS:
158958-74-8
MF:
C13H8BrFN2
Structure:
Chemical Name:
1,2-dimethyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-imidazole
CAS:
2223050-13-1
MF:
C11H19BN2O2
Structure:
Chemical Name:
phenyl (R)-(5-(2-(2,5-difluorophenyl)pyrrolidin-1-yl)pyrazolo[1,5-a]pyrimidin-3-yl)carbamate
CAS:
2135871-21-3
MF:
C23H19F2N5O2
Structure:
Chemical Name:
2'-(Methylthio)-7',8'-dihydro-6'H-spiro[cyclohexane-1,9'-pyrazino[1',2':1,5]pyrrolo[2,3-d]pyrimidin]-6'-one
CAS:
2170747-00-7
MF:
C15H18N4OS
Structure:
Chemical Name:
6,7-Dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-ol
CAS:
1557178-09-2
MF:
C6H8N2O2
Structure:
Chemical Name:
1H-Imidazole, 1,1'-(oxydi-4,1-phenylene)bis-
CAS:
13120-43-9
MF:
C18H14N4O
Structure:
Chemical Name:
1H-Imidazole, 1,1'-(2,5-dimethyl-1,4-phenylene)bis-
CAS:
1347702-73-1
MF:
C14H14N4
Structure:
Chemical Name:
4,6- diisopropylpyrimidin-5-amine
CAS:
2168417-89-6
MF:
C10H17N3
Structure:
Chemical Name:
4,4'-Bi-1H-pyrazole
CAS:
25240-33-9
MF:
C6H6N4
Structure:
Chemical Name:
2,4,6-trichlorobenzimidazole
CAS:
142356-47-6
MF:
C7H3Cl3N2
Structure:
Chemical Name:
4-[(S)-4-Boc-2-methyl-1-piperazinyl]-6-fluoro-7-(2-fluoro-6-hydroxyphenyl)-1-(2-isopropyl-4-methyl-3-pyridyl)pyrido[2,3-d]pyrimidin-2(1H)-one
CAS:
2252403-85-1
MF:
C32H36F2N6O4
Structure:
Chemical Name:
2,2'-Bioxazole, 4,4'-bis(1,1-dimethylethyl)-4,4',5,5'-tetrahydro-, (4S,4'S)-
CAS:
135565-31-0
MF:
C14H24N2O2