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Heterocyclic Compounds

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Heterocyclic compounds are a class of compounds that consist of carbon atoms and non-carbon atoms altogether forming a cyclic skeletal structure. These non-carbon atoms are collectively referred to as a heteroatom. The common heteroatoms include nitrogen, oxygen, and sulfur. Lactones, lactams, cyclic ethers that we’ve already learned are heterocyclic compounds. With similar properties of congeneric open-chain compounds, they will be discussed in corresponding chapters. This chapter will mainly discuss heterocyclic compounds with relatively stable ring system and with a certain degree of aromaticity, also known as aromatic heterocyclic compound.

There are many kinds and a large number of heterocyclic compounds widely distributed in nature. Many natural heterocyclic compounds in animals and plants play an important physiological role in the body. For example, heterocyclic structure exists in chlorophyll in plants, hemoglobin in animal blood, alkaloids and glycosides as the active ingredient in herbs, some antibiotics and vitamins, certain composition of amino acids in protein and bases in nucleotide. About half of the existing medicines have heterocyclic structures. Thus, heterocyclic compounds play an important role in organic compounds especially in organic medicines.

The most common and also the most important heterocyclic compounds are that with five-membered or six-membered heterocyclic ring and their fused heterocyclic compounds. Therefore, according to the size of the ring, heterocyclic compounds can be divided into five-membered compounds and six-membered heterocyclic compounds. E.g., furan, thiophene, pyrrole, imidazole, triazole and their fused heterocyclic compounds, indole, benzimidazole and diphenylene-oxide are all five-membered heterocyclic compounds, while pyridine, pyrimidine and their fused heterocyclic compounds, quinoline and quinazoline are all six-membered heterocyclic compounds.

According to the number of hetero atoms, five-membered compounds and six-membered heterocyclic compounds can be divided into one-hetero-atom-containing heterocyclic compounds and two-hetero-atom-containing and several-hetero-atom-containing heterocyclic compounds. E.g., furan, thiophene, pyridine, indole, quinoline, dibenzofuran, etc. are one-hetero-atom-containing heterocyclic compounds; imidazole, pyrimidine, benzimidazole, quinazoline, etc. are two-hetero-atom-containing heterocyclic compounds; purine, comprising more than two hetero atoms, is a several-hetero-atom-containing heterocyclic compound. According to the form of the ring in the molecule, heterocyclic compounds can be divided into single-heterocyclic compounds and fused heterocyclic compounds. E.g., furan, pyridine, pyrimidine, imidazole, etc. are single-heterocyclic compounds and indole, quinoline, dibenzofuran, purines, etc. are fused heterocyclic compounds.

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Structure:
Chemical Name:
5-hydroxy-pyrazole
CAS:
60456-92-0
MF:
C3H4N2O
Structure:
Chemical Name:
2,4-Dichloro-6-methylthieno[2,3-d]pyrimidine
CAS:
76872-23-6
MF:
C7H4Cl2N2S
Structure:
Chemical Name:
4-broMo-2-(2-Methoxyethoxy)pyridine
CAS:
1289131-55-0
MF:
C8H10BrNO2
Structure:
Chemical Name:
1-tert-Butyl 2-methyl 2-methylpyrrolidine-1,2-dicarboxylate
CAS:
317355-80-9
MF:
C12H21NO4
Structure:
Chemical Name:
1H-Pyrazole-1-propanenitrile, β-cyclopentyl-4-[7-[[2-(triMethylsilyl)ethoxy]Methyl]-7H-pyrrolo[2,3-d]pyriMidin-4-yl]-, (βR)-
CAS:
941685-40-1
MF:
C23H32N6OSi
Structure:
Chemical Name:
1H-Pyrazole-1-propanenitrile, β-cyclopentyl-4-[7-[[2-(triMethylsilyl)ethoxy]Methyl]-7H-pyrrolo[2,3-d]pyriMidin-4-yl]-, (βR)-
CAS:
941685-40-1
MF:
C23H32N6OSi
Structure:
Chemical Name:
2,4-DICHLORO-5-FLUORO-7H-PYRROLO[2,3-D]PYRIMIDINE
CAS:
1053228-29-7
MF:
C6H2Cl2FN3
Structure:
Chemical Name:
3-BroMo-pyrrolidine hydrochloride
CAS:
952748-39-9
MF:
C4H9BrClN
Structure:
Chemical Name:
5-bromo-4-fluoro-1H-indazole
CAS:
1082041-85-7
MF:
C7H4BrFN2
Structure:
Chemical Name:
Ethyl 7H-pyrrolo[2,3-d]pyriMidine-4-carboxylate
CAS:
915142-91-5
MF:
C9H9N3O2
Structure:
Chemical Name:
5-benzyl-4,5,6,7-tetrahydroisoxazolo[4,3-c]pyridine
CAS:
35005-72-2
MF:
C13H14N2O
Structure:
Chemical Name:
3-diMethylpyrrolidine-3-carboxylic acid
CAS:
912771-28-9
MF:
C7H13NO2
Structure:
Chemical Name:
4-PyriMidinecarboxylic acid, 5-broMo-2-(Methylthio)-, ethyl ester
CAS:
74840-38-3
MF:
C8H9BrN2O2S
Structure:
Chemical Name:
2-(4-DIMETHYLAMINO-PHENYL)-1 H-BENZOIMIDAZOL-5-YLAMINE
CAS:
40655-14-9
MF:
C15H16N4
Structure:
Chemical Name:
10-BroMo-2-iodo-9-Methyl-5,6-dihydrobenzo[f]iMidazo[1,2-d][1,4]oxazepine
CAS:
1401305-33-6
MF:
C12H10BrIN2O
Structure:
Chemical Name:
5-BroMo-2-(Methylsulfinyl)pyriMidine
CAS:
79685-17-9
MF:
C5H5BrN2OS
Structure:
Chemical Name:
3-[[3,5-bis(trifluoroMethyl)phenyl]aMino]-4-[[(1R,2R)-2-(1-pyrrolidinyl)cyclohexyl]aMino]-
CAS:
1346683-42-8
MF:
C22H23F6N3O2
Structure:
Chemical Name:
2-(5-Borono-2-pyrimidinyl)imidodicarbonic acid 1,3-bis(tert-butyl) ester
CAS:
1360950-40-8
MF:
C14H22BN3O6
Structure:
Chemical Name:
7-broMo-5,5-diMethyl-5H-indeno[1,2-b]pyridine
CAS:
1041263-18-6
MF:
C14H12BrN
Structure:
Chemical Name:
5-Bromo-2-ethyl-1H-pyrrolo[2,3-b]pyridine
CAS:
1228666-29-2
MF:
C9H9BrN2
Structure:
Chemical Name:
H-PRO-OET HCL
CAS:
33305-75-8
MF:
C7H14ClNO2
Structure:
Chemical Name:
3,6-DI-2-PYRIDYL-1,2,4,5-TETRAZINE
CAS:
1671-87-0
MF:
C12H8N6
Structure:
Chemical Name:
Tribenzylphosphine(1,5-cyclooctadiene)[1,3-bis(2,4,6-triMethylphenyl)iMidazol-2-ylidene]iridiuM(I) hexafluorophosphate, Min. 98%
CAS:
1019853-01-0
MF:
C50H57F6IrN2P2-
Structure:
Chemical Name:
2-(2,4-difluorophenyl)-5-(trifluoroMethyl)pyridine
CAS:
387827-64-7
MF:
C12H6F5N
Structure:
Chemical Name:
(S)-6-(5-(7-broMo-9,9-difluoro-9H-fluoren-2-yl)-1H-iMidazol-2-yl)-5-azaspiro[2.4]heptane hydrochloride
CAS:
2004675-25-4
MF:
C22H19BrClF2N3
Structure:
Chemical Name:
2(1H)-PyriMidinone, 4-aMino-1-[(2S)-2-hydroxy-3-(triphenylMethoxy)propyl]-
CAS:
132336-30-2
MF:
C26H25N3O3
Structure:
Chemical Name:
2-(Pyrimidin-2-yl)benzoic acid
CAS:
400892-62-8
MF:
C11H8N2O2
Structure:
Chemical Name:
PMK ethyl glycidate
CAS:
28578-16-7
MF:
C13H14O5
Structure:
Chemical Name:
N-CBZ-trans-4-Hydroxy-D-prolinol
CAS:
1448706-36-2
MF:
C13H17NO4
Structure:
Chemical Name:
(S)-3-Methyl-pyrrolidine-3-carboxylic acid
CAS:
1427203-57-3
MF:
C6H11NO2
Structure:
Chemical Name:
4-(PYRROLIDIN-1-YL)BENZYLAMINE
CAS:
114365-04-7
MF:
C11H16N2
Structure:
Chemical Name:
6-Bromo-3-isopropyl-[1,2,4]triazolo[4,3-a]pyridine hydrochloride
CAS:
668980-99-2
MF:
C9H11BrClN3
Structure:
Chemical Name:
Umicore M73 SIMes
CAS:
1025728-57-7
MF:
C36H46Cl2N3O3Ru
Structure:
Chemical Name:
Dichloro[1,3-bis(2,6-isopropylphenyl)-2-imidazolidinylidene](2-isopropoxyphenylmethylene)ruthenium(II)
CAS:
635679-24-2
MF:
C37H49Cl2N2ORu
Structure:
Chemical Name:
5-benzyloctahydro-1H-pyrrolo[3,2-c]pyridine
CAS:
1506066-94-9
MF:
C14H20N2
Structure:
Chemical Name:
ETHYL 2-(2-FORMYLAMINO-1,3-THIAZOL-4-YL)-2-OXOACETATE
CAS:
64987-03-7
MF:
C8H8N2O4S
Structure:
Chemical Name:
1-METHYL-4-NITRO-1H-PYRAZOLE
CAS:
82208-47-7
MF:
C4H5N3O2
Structure:
Chemical Name:
[C2MIm]SbF6
CAS:
305370-81-4
MF:
C6H11F6N2P
Structure:
Chemical Name:
(2S,4R)-tert-Butyl 2-(hydroxymethyl)-4-(methylsulfonyloxy)pyrrolidine-1-carboxylate
CAS:
148017-07-6
MF:
C11H21NO6S
Structure:
Chemical Name:
5-chloro-2-(4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenoxy)pyridine
CAS:
1426337-02-1
MF:
C17H19BClNO3
Structure:
Chemical Name:
4-Chloro-5-fluoro-6-methoxy-2-methylpyrimidine
CAS:
1383976-40-6
MF:
C6H6ClFN2O
Structure:
Chemical Name:
4-chloro-6-methoxy-Pyrido[3,2-d]pyrimidine
CAS:
1417555-18-0
MF:
C8H6ClN3O
Structure:
Chemical Name:
5-iodo-2-Pyridinecarboxamide
CAS:
41960-46-7
MF:
C6H5IN2O
Structure:
Chemical Name:
6-bromo-3,3-dimethyl-2,3-dihydro-1H-pyrrolo[3,2-b]pyridine
CAS:
1259512-11-2
MF:
C9H11BrN2
Structure:
Chemical Name:
2-amino-5-(trifluoromethyl)pyridine-3-carbonitrile
CAS:
1211514-97-4
MF:
C7H4F3N3
Structure:
Chemical Name:
5,6-difluoro-2-(2-hexyldecyl)-2H-benzo[d][1,2,3]triazole
CAS:
1563332-24-0
MF:
C22H35F2N3
Structure:
Chemical Name:
(R)-N- (4-(chlorodifluoromethoxy)phenyl)- 6-(3- hydroxypyrrolidin-1- yl)-5- (1H-pyrazol- 5-yl)nicotinamide
CAS:
1492952-76-7
MF:
C20H18ClF2N5O3
Structure:
Chemical Name:
3,6-dibromo-2-(trifluoromethyl)pyridine
CAS:
1211588-54-3
MF:
C6H2Br2F3N
Structure:
Chemical Name:
4-(Difluoromethylene)-4,5-dihydro-3H-pyrazole
CAS:
88766-66-9
MF:
C4H4F2N2
Structure:
Chemical Name:
5-Chloro-7-iodo-1H-pyrazolo[3,4-c]pyridine
CAS:
1951371-15-5
MF:
C6H3ClIN3
Structure:
Chemical Name:
(1H-PYRAZOL-3-YL)METHANOL
CAS:
23585-49-1
MF:
C4H6N2O
Structure:
Chemical Name:
6-METHYLIMIDAZO[2,1-B][1,3]THIAZOLE-5-CARBOXYLIC ACID
CAS:
77628-51-4
MF:
C7H6N2O2S
Structure:
Chemical Name:
N,N'-bis(2,6-bis(diphenylmethyl)-4-methoxyphenyl)imidazolium chloride
CAS:
1416368-03-0
MF:
C69H57ClN2O2
Structure:
Chemical Name:
1,3,5-Triazine-2,4-dimethoxy-6-(4-morpholinyl)-
CAS:
241483-00-1
MF:
C9H14N4O3
Structure:
Chemical Name:
3-Chloro-2-(trifluoromethyl)-pyridine
CAS:
749875-32-9
MF:
C6H3ClF3N
Structure:
Chemical Name:
Spiro[cyclohexane-1,3'(1'H)-furo[3,4-c]pyridine]-1',4-dione
CAS:
328233-20-1
MF:
C12H11NO3
Structure:
Chemical Name:
5-(BROMOMETHYL)-3-METHYLISOXAZOLE
CAS:
36958-61-9
MF:
C5H6BrNO
Structure:
Chemical Name:
4-(CHLOROMETHYL)-2-(2-FURYL)-1,3-THIAZOLE
CAS:
13386-49-7
MF:
C8H6ClNOS
Structure:
Chemical Name:
4-BROMO-6-CHLORO-1H-INDAZOLE
CAS:
885519-03-9
MF:
C7H4BrClN2
Structure:
Chemical Name:
(S)-2-N-BOC-AMINOMETHYLPYRROLIDINE
CAS:
141774-70-1
MF:
C10H20N2O2
Structure:
Chemical Name:
Isostearic Acid
CAS:
30399-84-9
MF:
C18H36O2
Structure:
Chemical Name:
2-(4-FLUOROPHENYL)IMIDAZO[1,2-A]PYRIMIDINE-3-CARBALDEHYDE
CAS:
878436-47-6
MF:
C13H8FN3O
Structure:
Chemical Name:
2-PHENYL-PYRROLIDINE-3-CARBOXYLIC ACID
CAS:
1241684-17-2
MF:
C11H13NO2
Structure:
Chemical Name:
6-bromo-1,2-benzoxazole
CAS:
1060802-88-1
MF:
C7H4BrNO
Structure:
Chemical Name:
6-Fluoro-7-azaindole
CAS:
898746-42-4
MF:
C7H5FN2
Structure:
Chemical Name:
N-[(2S)-2-Pyrrolidinylmethyl]-trifluoromethanesulfonamide
CAS:
782495-18-5
MF:
C6H11F3N2O2S
Structure:
Chemical Name:
morpholine
CAS:
99108-56-2
MF:
C4H9NO
Structure:
Chemical Name:
yclopropanecarboxylic acid N-[4-[[4-chloro-6-(5-methyl-2H-pyrazol-3-ylamino)pyrimidin-2-yl]sulfanyl]phenyl]amide
CAS:
639090-55-4
MF:
C18H17ClN6OS
Structure:
Chemical Name:
3-methyl-5-nitro-1H-pyrazole
CAS:
1048925-02-5
MF:
C4H5N3O2
Structure:
Chemical Name:
3,4-Dithia-7H-cyclopenta[a]pentalene
CAS:
389-58-2
MF:
C9H6S2
Structure:
Chemical Name:
3-(3-BROMO-PHENYL)-ISOXAZOL-5-YLAMINE
CAS:
119162-52-6
MF:
C9H7BrN2O
Structure:
Chemical Name:
4-CHLORO-7-(TRIFLUOROMETHYL)QUINAZOLINE
CAS:
16499-65-3
MF:
C9H4ClF3N2
Structure:
Chemical Name:
ETHYL 4,5-DIHYDRO-4-OXO-1H-PYRROLO[3,2-D]PYRIMIDINE-7-CARBOXYLATE
CAS:
853058-41-0
MF:
C9H9N3O3
Structure:
Chemical Name:
4-TERT-BUTYL-1H-IMIDAZOL-2-AMINE
CAS:
82560-19-8
MF:
C7H13N3
Structure:
Chemical Name:
1H,1'H-5,5'-BIBENZO[D]IMIDAZOLE
CAS:
3097-03-8
MF:
C14H10N4
Structure:
Chemical Name:
(R)-1-BOC-3-(3-CARBOXY-PHENOXY)-PYRROLIDINE
CAS:
222987-19-1
MF:
C16H21NO5
Structure:
Chemical Name:
5,6-DIHYDROSPIRO[CYCLOPENTA[C]PYRIDINE-7,2'-PYRROLIDINE]
CAS:
463303-91-5
MF:
C11H14N2
Structure:
Chemical Name:
2,4-DICHLORO-7-(TRIFLUOROMETHYL)QUINAZOLINE
CAS:
396-02-1
MF:
C9H3Cl2F3N2
Structure:
Chemical Name:
3-(6-BROMOPYRIDIN-2-YL)-6-CHLOROIMIDAZO[1,2-A]PYRIDINE
CAS:
1044733-65-4
MF:
C12H7BrClN3
Structure:
Chemical Name:
(S,S)-2,2'-METHYLENEBIS(4-PHENYL-2-OXAZOLINE)
CAS:
132098-59-0
MF:
C19H18N2O2
Structure:
Chemical Name:
3-(2-BROMO-PHENYL)-1H-PYRAZOLE
CAS:
114382-20-6
MF:
C9H7BrN2
Structure:
Chemical Name:
12H-Benzofuro[2,3-a]carbazole
CAS:
1338919-70-2
MF:
C18H11NO
Structure:
Chemical Name:
1-Benzylimidazole-5-carboxylic Acid
CAS:
5317-07-7
MF:
C11H10N2O2
Structure:
Chemical Name:
(R)-5,7-difluorochroman-4-ol
CAS:
1270294-05-7
MF:
C9H8F2O2
Structure:
Chemical Name:
6-bromo-7-chloroquinazoline-2,4-diol
CAS:
1166378-30-8
MF:
C8H4BrClN2O2
Structure:
Chemical Name:
2,4,6-tris(3,5-dimethylpyrazol-1-yl)-1,3,5-triazine
CAS:
154403-27-7
MF:
C18H21N9
Structure:
Chemical Name:
4,4',4'',4'''-(2,2',6,6'-tetramethoxy-[1,1'-biphenyl]-3,3',5,5'-tetrayl)tetrapyridine
CAS:
1799509-00-4
MF:
C36H30N4O4
Structure:
Chemical Name:
4,4'-(5'-(4-(pyridin-4-yl)phenyl)-[1,1':3',1''-terphenyl]-4,4''-diyl)dipyridine
CAS:
170165-85-2
MF:
C39H27N3
Structure:
Chemical Name:
4-D-methylthiazolidine-2-thine
CAS:
114296-85-4
MF:
C4H7NS2
Structure:
Chemical Name:
2-(Dibenzo[b,d]furan-1-yl)-4,4,5,5,-tetramethyl-1,3,2-dioxaborolane
CAS:
1822310-41-7
MF:
C18H19BO3
Structure:
Chemical Name:
5-Bromo-4-cyclopropyl-6-methoxypyrimidine
CAS:
1649454-57-8
MF:
C8H9BrN2O
Structure:
Chemical Name:
6-bromo-2,3,8-trimethylimidazo[1,2-a]pyridine
CAS:
1215953-19-7
MF:
C10H11BrN2
Structure:
Chemical Name:
5-(aminomethyl)-2-pyrrolidinone oxalate
CAS:
1050590-36-7
MF:
C7H12N2O5
Structure:
Chemical Name:
3-chloro-2-(pyrrolidin-3-yloxy)pyridine
CAS:
817187-51-2
MF:
C9H11ClN2O
Structure:
Chemical Name:
PS1037
CAS:
908864-14-2
MF:
C17H25N5O2
Structure:
Chemical Name:
(2S,4R)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide hydrochloride
CAS:
1448189-90-9
MF:
C16H20ClN3O2S
Structure:
Chemical Name:
(2R,4S)-4-FLUORO-2-METHYLPYRROLIDINE HCL
CAS:
1951424-96-6
MF:
C5H11ClFN
Structure:
Chemical Name:
ETHYL 2-BROMO-4-CHLORO-1H-IMIDAZOLE-5-CARBOXYLATE
CAS:
1956318-26-5
MF:
C6H6BrClN2O2
Structure:
Chemical Name:
6-BROMO-3-METHYLBENZODISOXAZOLE
CAS:
66033-69-0
MF:
C8H6BrNO
Structure:
Chemical Name:
BOC-D-NVA-OSU
CAS:
213178-93-9
MF:
C14H22N2O6